Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC108860.2-201ENST00000562760 2183 ntBASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC141586.5-201ENST00000624546 2050 ntBASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TSPY12P-201ENST00000421279 868 ntBASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RN7SL606P-201ENST00000472779 293 ntBASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AL023806.1-201ENST00000603994 1649 ntBASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PP12613-201ENST00000424958 2230 ntBASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL024508.2-201ENST00000607749 1894 ntBASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TCRBV4S1A1TA0A5B7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms