Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 KRT18P55-202ENST00000578578 1546 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 KRT8P47-201ENST00000604727 1398 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 AC125634.1-201ENST00000438758 1403 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 POM121L3P-201ENST00000419331 1163 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 FOSL1P1-201ENST00000511041 816 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 AC138894.3-201ENST00000603787 634 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 AL138831.2-201ENST00000606564 490 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 AL121772.3-201ENST00000610840 674 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 AC100803.2-201ENST00000562459 1963 ntBASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CLCA3PQ9Y6N3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLCA3PQ9Y6N3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 AC096582.2-201ENST00000510860 516 ntBASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 LINC01711-201ENST00000598340 967 ntBASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 AC097374.2-201ENST00000618617 1306 ntBASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCA3PQ9Y6N3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCA3PQ9Y6N3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms