Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.28■□□□□ 0.52
DNMT3BQ9UBC3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 C20orf181-201ENST00000623918 480 ntBASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.27■□□□□ 0.52
DNMT3BQ9UBC3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DNMT3BQ9UBC3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
DNMT3BQ9UBC3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DNMT3BQ9UBC3 GPR89P-201ENST00000407924 1495 ntBASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 AL353135.1-201ENST00000606729 504 ntBASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 AP000997.3-201ENST00000623333 2250 ntBASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DNMT3BQ9UBC3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 KRT18P28-201ENST00000453838 1332 ntBASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 MRPL20P1-201ENST00000400819 433 ntBASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 LINC00982-205ENST00000420957 435 ntBASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 AC010654.1-201ENST00000615722 808 ntBASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms