Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDE1Q9NXR1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 AC026366.1-201ENST00000488803 879 ntBASIC17.05■□□□□ 0.32
NDE1Q9NXR1 AC233263.1-201ENST00000578059 224 ntBASIC17.05■□□□□ 0.32
NDE1Q9NXR1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NDE1Q9NXR1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 AC060834.1-201ENST00000443027 2032 ntBASIC17.04■□□□□ 0.32
NDE1Q9NXR1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.04■□□□□ 0.32
NDE1Q9NXR1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.04■□□□□ 0.32
NDE1Q9NXR1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms