Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 AC009949.1-201ENST00000623048 1830 ntBASIC16.16■□□□□ 0.18
RYDENQ9NUL5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 AP000997.3-201ENST00000623333 2250 ntBASIC16.16■□□□□ 0.18
RYDENQ9NUL5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 AC009113.1-201ENST00000570267 2443 ntBASIC16.16■□□□□ 0.18
RYDENQ9NUL5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RYDENQ9NUL5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 CSNK1A1P3-201ENST00000504105 330 ntBASIC16.15■□□□□ 0.18
RYDENQ9NUL5 AC093909.1-201ENST00000504731 1122 ntBASIC16.15■□□□□ 0.18
RYDENQ9NUL5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 AL023583.1-201ENST00000607518 1143 ntBASIC16.15■□□□□ 0.18
RYDENQ9NUL5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RYDENQ9NUL5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RYDENQ9NUL5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 LAGE3P1-201ENST00000425356 484 ntBASIC16.14■□□□□ 0.17
RYDENQ9NUL5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 AL773604.1-201ENST00000617417 272 ntBASIC16.14■□□□□ 0.17
RYDENQ9NUL5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RYDENQ9NUL5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC009336.1-201ENST00000608941 1553 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 KRT8P10-201ENST00000450021 1447 ntBASIC16.13■□□□□ 0.17
RYDENQ9NUL5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RYDENQ9NUL5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms