Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
VCX3BQ9H321 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 AC022898.2-201ENST00000616822 1312 ntBASIC16.76■□□□□ 0.27
VCX3BQ9H321 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 Z85996.1-201ENST00000494644 937 ntBASIC16.76■□□□□ 0.27
VCX3BQ9H321 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3BQ9H321 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.76■□□□□ 0.27
VCX3BQ9H321 AL163051.1-201ENST00000569214 1512 ntBASIC16.75■□□□□ 0.27
VCX3BQ9H321 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 AC007322.1-201ENST00000426983 750 ntBASIC16.75■□□□□ 0.27
VCX3BQ9H321 AC116407.2-201ENST00000613639 860 ntBASIC16.75■□□□□ 0.27
VCX3BQ9H321 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 LINC02228-204ENST00000642115 2962 ntBASIC16.75■□□□□ 0.27
VCX3BQ9H321 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VCX3BQ9H321 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3BQ9H321 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 AC137761.2-201ENST00000561729 223 ntBASIC16.74■□□□□ 0.27
VCX3BQ9H321 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 AC145350.3-201ENST00000569033 163 ntBASIC16.74■□□□□ 0.27
VCX3BQ9H321 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms