Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 KRT18P65-201ENST00000439811 1286 ntBASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC211476.1-201ENST00000503899 468 ntBASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 SART3-203ENST00000546611 1184 ntBASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC012640.2-201ENST00000561606 901 ntBASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC005336.2-201ENST00000593183 939 ntBASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC008735.5-201ENST00000623544 497 ntBASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.35■□□□□ 0.05
CXXC4Q9H2H0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CXXC4Q9H2H0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 AP000997.3-201ENST00000623333 2250 ntBASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CXXC4Q9H2H0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 METTL21AP1-201ENST00000438852 635 ntBASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 AC009154.2-201ENST00000621177 724 ntBASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
CXXC4Q9H2H0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms