Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 AC005104.2-201ENST00000427818 678 ntBASIC18.18■□□□□ 0.5
RNF38Q9H0F5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 AC136632.2-201ENST00000512891 861 ntBASIC18.18■□□□□ 0.5
RNF38Q9H0F5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 AC006538.3-201ENST00000612495 578 ntBASIC18.18■□□□□ 0.5
RNF38Q9H0F5 MIR1199-201ENST00000621445 119 ntBASIC18.18■□□□□ 0.5
RNF38Q9H0F5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 FZD10-202ENST00000539839 3282 ntBASIC18.17■□□□□ 0.5
RNF38Q9H0F5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 NCF1C-201ENST00000438382 1427 ntBASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 FAM197Y3-203ENST00000618346 717 ntBASIC18.17■□□□□ 0.5
RNF38Q9H0F5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 AC005593.1-201ENST00000624894 515 ntBASIC18.17■□□□□ 0.5
RNF38Q9H0F5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF38Q9H0F5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 ELK2BP-201ENST00000415014 1224 ntBASIC18.16■□□□□ 0.5
RNF38Q9H0F5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 AL139424.1-201ENST00000607572 797 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms