Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM7Q9C029 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
TRIM7Q9C029 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM7Q9C029 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.7■□□□□ 0.58
TRIM7Q9C029 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM7Q9C029 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM7Q9C029 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM7Q9C029 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRIM7Q9C029 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM7Q9C029 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.69■□□□□ 0.58
TRIM7Q9C029 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 HLA-J-201ENST00000462773 1622 ntBASIC18.69■□□□□ 0.58
TRIM7Q9C029 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM7Q9C029 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM7Q9C029 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 AL645929.1-201ENST00000420084 975 ntBASIC18.68■□□□□ 0.58
TRIM7Q9C029 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM7Q9C029 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM7Q9C029 AC011270.2-201ENST00000624293 2550 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms