Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 KRT8P10-201ENST00000450021 1447 ntBASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 MYCLP1-201ENST00000372451 1075 ntBASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 IFNL4P1-201ENST00000607083 540 ntBASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 AD001527.2-201ENST00000622994 785 ntBASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCM2Q9BSQ5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 ABCD1P5-201ENST00000445663 754 ntBASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 AL353593.2-201ENST00000602529 1483 ntBASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCM2Q9BSQ5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.28■□□□□ 0.36
CCM2Q9BSQ5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms