Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARID3AQ99856 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.05■□□□□ 0.8
ARID3AQ99856 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.05■□□□□ 0.8
ARID3AQ99856 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ARID3AQ99856 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.05■□□□□ 0.8
ARID3AQ99856 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ARID3AQ99856 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.05■□□□□ 0.8
ARID3AQ99856 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.05■□□□□ 0.8
ARID3AQ99856 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
ARID3AQ99856 AC133561.5-201ENST00000635547 218 ntBASIC20.05■□□□□ 0.8
ARID3AQ99856 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.05■□□□□ 0.8
ARID3AQ99856 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ARID3AQ99856 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.05■□□□□ 0.8
ARID3AQ99856 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARID3AQ99856 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARID3AQ99856 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.05■□□□□ 0.8
ARID3AQ99856 AP002414.2-201ENST00000591780 3365 ntBASIC20.04■□□□□ 0.8
ARID3AQ99856 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ARID3AQ99856 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.04■□□□□ 0.8
ARID3AQ99856 KRT8P45-201ENST00000414328 1447 ntBASIC20.04■□□□□ 0.8
ARID3AQ99856 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
ARID3AQ99856 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ARID3AQ99856 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.04■□□□□ 0.8
ARID3AQ99856 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.04■□□□□ 0.8
ARID3AQ99856 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 AC145285.6-201ENST00000604632 637 ntBASIC20.04■□□□□ 0.8
ARID3AQ99856 CR769767.2-201ENST00000622735 460 ntBASIC20.04■□□□□ 0.8
ARID3AQ99856 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ARID3AQ99856 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.04■□□□□ 0.8
ARID3AQ99856 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.04■□□□□ 0.8
ARID3AQ99856 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ARID3AQ99856 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.04■□□□□ 0.8
ARID3AQ99856 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARID3AQ99856 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC20.03■□□□□ 0.8
ARID3AQ99856 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.03■□□□□ 0.8
ARID3AQ99856 AC063926.3-201ENST00000624734 5658 ntBASIC20.03■□□□□ 0.8
ARID3AQ99856 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC20.03■□□□□ 0.8
ARID3AQ99856 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ARID3AQ99856 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 AC012306.2-201ENST00000609350 630 ntBASIC20.03■□□□□ 0.8
ARID3AQ99856 AC010653.2-201ENST00000623505 997 ntBASIC20.03■□□□□ 0.8
ARID3AQ99856 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ARID3AQ99856 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ARID3AQ99856 AC023824.1-201ENST00000562945 2975 ntBASIC20.03■□□□□ 0.8
ARID3AQ99856 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARID3AQ99856 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms