Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF2Q99805 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.36■□□□□ 0.21
TM9SF2Q99805 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF2Q99805 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.36■□□□□ 0.21
TM9SF2Q99805 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF2Q99805 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF2Q99805 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 MIR149-201ENST00000384879 89 ntBASIC16.35■□□□□ 0.21
TM9SF2Q99805 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 AP002414.4-201ENST00000589764 1148 ntBASIC16.35■□□□□ 0.21
TM9SF2Q99805 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF2Q99805 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 AL096828.2-201ENST00000567259 1965 ntBASIC16.35■□□□□ 0.21
TM9SF2Q99805 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TM9SF2Q99805 AC022211.2-201ENST00000585075 2527 ntBASIC16.35■□□□□ 0.21
TM9SF2Q99805 MYLKP1-201ENST00000509077 1580 ntBASIC16.34■□□□□ 0.21
TM9SF2Q99805 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 IGHGP-201ENST00000390555 1178 ntBASIC16.34■□□□□ 0.21
TM9SF2Q99805 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 AL450487.1-201ENST00000426799 995 ntBASIC16.34■□□□□ 0.21
TM9SF2Q99805 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 PRELID1P1-202ENST00000567272 903 ntBASIC16.34■□□□□ 0.21
TM9SF2Q99805 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 AL390719.2-201ENST00000606993 987 ntBASIC16.34■□□□□ 0.21
TM9SF2Q99805 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF2Q99805 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TM9SF2Q99805 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TM9SF2Q99805 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TM9SF2Q99805 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms