Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.74□□□□□ -0.05
CCL13Q99616 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 AC122714.2-201ENST00000502787 707 ntBASIC14.74□□□□□ -0.05
CCL13Q99616 KRT18P31-201ENST00000506277 1292 ntBASIC14.74□□□□□ -0.05
CCL13Q99616 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.74□□□□□ -0.05
CCL13Q99616 AL732292.2-201ENST00000609649 430 ntBASIC14.74□□□□□ -0.05
CCL13Q99616 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CCL13Q99616 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL13Q99616 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCL13Q99616 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL13Q99616 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL13Q99616 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL13Q99616 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCL13Q99616 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCL13Q99616 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
CCL13Q99616 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CCL13Q99616 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.73□□□□□ -0.05
CCL13Q99616 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.73□□□□□ -0.05
CCL13Q99616 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.73□□□□□ -0.05
CCL13Q99616 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.73□□□□□ -0.05
CCL13Q99616 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.73□□□□□ -0.05
CCL13Q99616 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
CCL13Q99616 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 OR6D1P-203ENST00000641209 4860 ntBASIC14.73□□□□□ -0.05
CCL13Q99616 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.73□□□□□ -0.05
CCL13Q99616 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCL13Q99616 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL13Q99616 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCL13Q99616 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.72□□□□□ -0.05
CCL13Q99616 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
CCL13Q99616 TSPY19P-201ENST00000418461 509 ntBASIC14.72□□□□□ -0.05
CCL13Q99616 AC103564.2-201ENST00000432853 1299 ntBASIC14.72□□□□□ -0.05
CCL13Q99616 TSPY18P-201ENST00000441642 509 ntBASIC14.72□□□□□ -0.05
CCL13Q99616 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.72□□□□□ -0.05
CCL13Q99616 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.72□□□□□ -0.05
CCL13Q99616 AC109462.3-201ENST00000573934 613 ntBASIC14.72□□□□□ -0.05
CCL13Q99616 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.72□□□□□ -0.05
CCL13Q99616 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCL13Q99616 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.72□□□□□ -0.05
CCL13Q99616 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.72□□□□□ -0.05
CCL13Q99616 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.72□□□□□ -0.05
CCL13Q99616 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCL13Q99616 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CCL13Q99616 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCL13Q99616 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.72□□□□□ -0.05
CCL13Q99616 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.72□□□□□ -0.05
CCL13Q99616 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.72□□□□□ -0.05
CCL13Q99616 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CCL13Q99616 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL13Q99616 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CCL13Q99616 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCL13Q99616 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms