Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 AC108073.2-201ENST00000464002 357 ntBASIC20.44■□□□□ 0.86
CCDC17Q96LX7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 AC064836.3-201ENST00000607928 673 ntBASIC20.44■□□□□ 0.86
CCDC17Q96LX7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC17Q96LX7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 PTCHD3P3-201ENST00000403073 906 ntBASIC20.43■□□□□ 0.86
CCDC17Q96LX7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 CRYGEP-201ENST00000412192 528 ntBASIC20.43■□□□□ 0.86
CCDC17Q96LX7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 GGTLC5P-201ENST00000617623 998 ntBASIC20.43■□□□□ 0.86
CCDC17Q96LX7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC17Q96LX7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 VN2R19P-201ENST00000442399 1052 ntBASIC20.42■□□□□ 0.86
CCDC17Q96LX7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 AC139530.3-201ENST00000620344 690 ntBASIC20.42■□□□□ 0.86
CCDC17Q96LX7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC17Q96LX7 BCL2-203ENST00000589955 5011 ntBASIC20.42■□□□□ 0.86
CCDC17Q96LX7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 LINC00304-203ENST00000565008 1864 ntBASIC20.41■□□□□ 0.86
CCDC17Q96LX7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 AL135999.2-201ENST00000622438 1686 ntBASIC20.41■□□□□ 0.86
CCDC17Q96LX7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC17Q96LX7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 AC020763.4-201ENST00000623414 4170 ntBASIC20.4■□□□□ 0.86
CCDC17Q96LX7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms