Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 AC060834.1-201ENST00000443027 2032 ntBASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC47A1Q96FL8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 DDX43P3-201ENST00000441064 443 ntBASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 AC066615.1-201ENST00000640911 628 ntBASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC47A1Q96FL8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms