Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 ID1-201ENST00000376105 1233 ntBASIC17.4■□□□□ 0.38
SPDL1Q96EA4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 RPPH1-201ENST00000516869 333 ntBASIC17.4■□□□□ 0.38
SPDL1Q96EA4 SLC25A1P4-201ENST00000567977 778 ntBASIC17.4■□□□□ 0.38
SPDL1Q96EA4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPDL1Q96EA4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.38
SPDL1Q96EA4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 FAM197Y1-201ENST00000421178 764 ntBASIC17.39■□□□□ 0.37
SPDL1Q96EA4 CA15P1-201ENST00000481698 905 ntBASIC17.39■□□□□ 0.37
SPDL1Q96EA4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 DGCR10-201ENST00000609839 495 ntBASIC17.39■□□□□ 0.37
SPDL1Q96EA4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SPDL1Q96EA4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.38■□□□□ 0.37
SPDL1Q96EA4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms