Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.74■□□□□ 0.27
LRRC58Q96CX6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 OR6D1P-203ENST00000641209 4860 ntBASIC16.74■□□□□ 0.27
LRRC58Q96CX6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC58Q96CX6 KRT89P-201ENST00000620027 1478 ntBASIC16.73■□□□□ 0.27
LRRC58Q96CX6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.73■□□□□ 0.27
LRRC58Q96CX6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 AC128688.1-201ENST00000487626 519 ntBASIC16.73■□□□□ 0.27
LRRC58Q96CX6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 AL512604.3-201ENST00000569583 964 ntBASIC16.73■□□□□ 0.27
LRRC58Q96CX6 MIR4785-201ENST00000585005 73 ntBASIC16.73■□□□□ 0.27
LRRC58Q96CX6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC58Q96CX6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 AC024563.2-201ENST00000603282 481 ntBASIC16.72■□□□□ 0.27
LRRC58Q96CX6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 LINC02012-201ENST00000608206 1725 ntBASIC16.72■□□□□ 0.27
LRRC58Q96CX6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LRRC58Q96CX6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms