Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 IER3-202ENST00000376377 1350 ntBASIC17.1■□□□□ 0.33
NCLNQ969V3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLNQ969V3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.1■□□□□ 0.33
NCLNQ969V3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NCLNQ969V3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLNQ969V3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.09■□□□□ 0.33
NCLNQ969V3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.09■□□□□ 0.33
NCLNQ969V3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 AL645929.1-201ENST00000420084 975 ntBASIC17.09■□□□□ 0.33
NCLNQ969V3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 AP000550.4-202ENST00000639755 178 ntBASIC17.09■□□□□ 0.33
NCLNQ969V3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 KRT18P55-202ENST00000578578 1546 ntBASIC17.09■□□□□ 0.33
NCLNQ969V3 AC093010.1-201ENST00000473625 1624 ntBASIC17.09■□□□□ 0.33
NCLNQ969V3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.09■□□□□ 0.33
NCLNQ969V3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.09■□□□□ 0.33
NCLNQ969V3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLNQ969V3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLNQ969V3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLNQ969V3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLNQ969V3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NCLNQ969V3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLNQ969V3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NCLNQ969V3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NCLNQ969V3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLNQ969V3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NCLNQ969V3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLNQ969V3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.08■□□□□ 0.32
NCLNQ969V3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.08■□□□□ 0.32
NCLNQ969V3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.08■□□□□ 0.32
NCLNQ969V3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.08■□□□□ 0.32
NCLNQ969V3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NCLNQ969V3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.08■□□□□ 0.32
NCLNQ969V3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.08■□□□□ 0.32
NCLNQ969V3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.08■□□□□ 0.32
NCLNQ969V3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.08■□□□□ 0.32
NCLNQ969V3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
NCLNQ969V3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NCLNQ969V3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.08■□□□□ 0.32
NCLNQ969V3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NCLNQ969V3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NCLNQ969V3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
NCLNQ969V3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLNQ969V3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NCLNQ969V3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.08■□□□□ 0.32
NCLNQ969V3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLNQ969V3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLNQ969V3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 AL023806.1-201ENST00000603994 1649 ntBASIC17.07■□□□□ 0.32
NCLNQ969V3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NCLNQ969V3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms