Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 LINC00554-201ENST00000564841 3011 ntBASIC17.12■□□□□ 0.33
HIPK4Q8NE63 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 PCDHA1-201ENST00000378133 2726 ntBASIC17.12■□□□□ 0.33
HIPK4Q8NE63 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 AC009102.3-201ENST00000623118 1491 ntBASIC17.12■□□□□ 0.33
HIPK4Q8NE63 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.11■□□□□ 0.33
HIPK4Q8NE63 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 AC036111.1-201ENST00000533973 1582 ntBASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 AL596257.1-201ENST00000641463 2694 ntBASIC17.11■□□□□ 0.33
HIPK4Q8NE63 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 MIR149-201ENST00000384879 89 ntBASIC17.11■□□□□ 0.33
HIPK4Q8NE63 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.11■□□□□ 0.33
HIPK4Q8NE63 AP001412.1-201ENST00000608405 714 ntBASIC17.11■□□□□ 0.33
HIPK4Q8NE63 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIPK4Q8NE63 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 CRYGFP-201ENST00000418459 633 ntBASIC17.1■□□□□ 0.33
HIPK4Q8NE63 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIPK4Q8NE63 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms