Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC026120.1-201ENST00000611536 926 ntBASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 REXO1L3P-201ENST00000622202 1288 ntBASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 AC138761.1-201ENST00000584393 385 ntBASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.37■□□□□ 0.21
COL27A1Q8IZC6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 TFAMP1-201ENST00000412727 736 ntBASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 FAM185BP-201ENST00000443595 716 ntBASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 TNXA-203ENST00000507684 2038 ntBASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
COL27A1Q8IZC6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 AP000974.1-201ENST00000623909 2387 ntBASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 FAM86GP-201ENST00000448322 971 ntBASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 AC067863.1-201ENST00000494933 530 ntBASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 AC243562.1-201ENST00000560672 389 ntBASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms