Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 HCG4P8-203ENST00000443049 980 ntBASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXR1Q6PIV2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 KRT8P45-201ENST00000414328 1447 ntBASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 AC007950.2-201ENST00000615045 2347 ntBASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXR1Q6PIV2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms