Protein–RNA interactions for Protein: Q6MZZ7

CAPN13, Calpain-13, humanhuman

Predicted RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13Q6MZZ7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 AC099398.1-201ENST00000567919 2776 ntBASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN13Q6MZZ7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 ATP5G2P1-201ENST00000433580 426 ntBASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 AC091607.1-201ENST00000490318 1060 ntBASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 AC009533.2-201ENST00000543664 586 ntBASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 NPAP1P7-201ENST00000613027 823 ntBASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN13Q6MZZ7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 AC005104.2-201ENST00000427818 678 ntBASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 MIR3180-1-201ENST00000580374 94 ntBASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 AP005901.3-202ENST00000581653 237 ntBASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 MIR3180-3-201ENST00000584616 94 ntBASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CAPN13Q6MZZ7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN13Q6MZZ7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN13Q6MZZ7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN13Q6MZZ7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN13Q6MZZ7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN13Q6MZZ7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms