Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CREB3L3Q68CJ9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 AC016396.2-201ENST00000562575 1417 ntBASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CREB3L3Q68CJ9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 RCN1P2-201ENST00000398357 915 ntBASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 HTR7P1-202ENST00000624664 4411 ntBASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CREB3L3Q68CJ9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 AL353593.2-201ENST00000602529 1483 ntBASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 INTS4P1-201ENST00000438455 1935 ntBASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 MYCLP1-201ENST00000372451 1075 ntBASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 AC096582.2-201ENST00000510860 516 ntBASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 AC093458.2-201ENST00000623150 629 ntBASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.88■□□□□ 0.93
CREB3L3Q68CJ9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 STK25P1-201ENST00000585406 838 ntBASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 AC092329.2-201ENST00000598402 547 ntBASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CREB3L3Q68CJ9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CREB3L3Q68CJ9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
CREB3L3Q68CJ9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms