Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH17Q12864 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH17Q12864 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH17Q12864 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH17Q12864 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CDH17Q12864 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CDH17Q12864 AP001094.4-201ENST00000579008 2176 ntBASIC17.77■□□□□ 0.43
CDH17Q12864 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDH17Q12864 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH17Q12864 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH17Q12864 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.76■□□□□ 0.43
CDH17Q12864 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH17Q12864 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 MYCLP1-201ENST00000372451 1075 ntBASIC17.76■□□□□ 0.43
CDH17Q12864 VENTXP7-201ENST00000475503 772 ntBASIC17.76■□□□□ 0.43
CDH17Q12864 AC122714.2-201ENST00000502787 707 ntBASIC17.76■□□□□ 0.43
CDH17Q12864 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH17Q12864 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH17Q12864 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CDH17Q12864 AC116407.4-201ENST00000623319 1061 ntBASIC17.76■□□□□ 0.43
CDH17Q12864 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH17Q12864 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH17Q12864 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH17Q12864 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH17Q12864 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 AC016734.2-201ENST00000624325 1377 ntBASIC17.76■□□□□ 0.43
CDH17Q12864 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH17Q12864 AC106820.2-201ENST00000563775 3264 ntBASIC17.76■□□□□ 0.43
CDH17Q12864 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH17Q12864 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH17Q12864 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
CDH17Q12864 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH17Q12864 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH17Q12864 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.75■□□□□ 0.43
CDH17Q12864 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH17Q12864 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH17Q12864 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH17Q12864 IGHV3-52-201ENST00000519770 353 ntBASIC17.75■□□□□ 0.43
CDH17Q12864 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 AC087388.1-201ENST00000571370 1112 ntBASIC17.75■□□□□ 0.43
CDH17Q12864 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH17Q12864 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH17Q12864 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH17Q12864 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH17Q12864 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH17Q12864 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH17Q12864 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH17Q12864 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
CDH17Q12864 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH17Q12864 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH17Q12864 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH17Q12864 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDH17Q12864 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH17Q12864 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH17Q12864 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 FAM220CP-201ENST00000395253 831 ntBASIC17.74■□□□□ 0.43
CDH17Q12864 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 PCED1CP-201ENST00000419887 785 ntBASIC17.74■□□□□ 0.43
CDH17Q12864 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms