Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL20P78556 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 AC004911.1-201ENST00000416316 871 ntBASIC13.87□□□□□ -0.19
CCL20P78556 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL20P78556 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL20P78556 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 AC131212.4-201ENST00000623606 975 ntBASIC13.87□□□□□ -0.19
CCL20P78556 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 AL365203.3-201ENST00000609742 2057 ntBASIC13.87□□□□□ -0.19
CCL20P78556 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 AC036111.1-201ENST00000533973 1582 ntBASIC13.87□□□□□ -0.19
CCL20P78556 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCL20P78556 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL20P78556 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 AC092384.3-202ENST00000564646 2873 ntBASIC13.86□□□□□ -0.19
CCL20P78556 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CCL20P78556 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCL20P78556 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL20P78556 PRKY-204ENST00000533551 1019 ntBASIC13.86□□□□□ -0.19
CCL20P78556 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 AC104640.1-201ENST00000562617 2109 ntBASIC13.86□□□□□ -0.19
CCL20P78556 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL20P78556 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL20P78556 LINC02012-201ENST00000608206 1725 ntBASIC13.86□□□□□ -0.19
CCL20P78556 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL20P78556 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL20P78556 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL20P78556 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCL20P78556 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL20P78556 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL20P78556 ZNRF2P3-201ENST00000424200 374 ntBASIC13.85□□□□□ -0.19
CCL20P78556 AC004980.1-204ENST00000429707 299 ntBASIC13.85□□□□□ -0.19
CCL20P78556 KRT18P5-201ENST00000436075 1291 ntBASIC13.85□□□□□ -0.19
CCL20P78556 AC060766.5-201ENST00000590539 871 ntBASIC13.85□□□□□ -0.19
CCL20P78556 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL20P78556 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL20P78556 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms