Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TPM4P67936 FAM201B-201ENST00000458407 597 ntBASIC19.73■□□□□ 0.75
TPM4P67936 SEC1P-202ENST00000473944 940 ntBASIC19.73■□□□□ 0.75
TPM4P67936 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM4P67936 AC092865.7-201ENST00000641832 219 ntBASIC19.73■□□□□ 0.75
TPM4P67936 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM4P67936 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TPM4P67936 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
TPM4P67936 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TPM4P67936 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TPM4P67936 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TPM4P67936 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TPM4P67936 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TPM4P67936 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 AC007663.1-201ENST00000438948 1240 ntBASIC19.72■□□□□ 0.75
TPM4P67936 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.72■□□□□ 0.75
TPM4P67936 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.72■□□□□ 0.75
TPM4P67936 AC233702.5-201ENST00000584107 538 ntBASIC19.72■□□□□ 0.75
TPM4P67936 AC024243.1-201ENST00000609234 778 ntBASIC19.72■□□□□ 0.75
TPM4P67936 AC010653.2-201ENST00000623505 997 ntBASIC19.72■□□□□ 0.75
TPM4P67936 AC018695.7-201ENST00000624587 2492 ntBASIC19.72■□□□□ 0.75
TPM4P67936 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.72■□□□□ 0.75
TPM4P67936 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
TPM4P67936 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM4P67936 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.72■□□□□ 0.75
TPM4P67936 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM4P67936 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM4P67936 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM4P67936 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM4P67936 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM4P67936 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM4P67936 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM4P67936 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM4P67936 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TPM4P67936 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TPM4P67936 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM4P67936 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM4P67936 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
TPM4P67936 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.71■□□□□ 0.75
TPM4P67936 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM4P67936 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.71■□□□□ 0.75
TPM4P67936 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 AC106886.4-201ENST00000623557 2502 ntBASIC19.7■□□□□ 0.74
TPM4P67936 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.7■□□□□ 0.74
TPM4P67936 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 UBE2SP1-201ENST00000450587 669 ntBASIC19.7■□□□□ 0.74
TPM4P67936 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 AC113404.2-201ENST00000507884 177 ntBASIC19.7■□□□□ 0.74
TPM4P67936 C2orf69P3-201ENST00000565542 1120 ntBASIC19.7■□□□□ 0.74
TPM4P67936 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.7■□□□□ 0.74
TPM4P67936 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TPM4P67936 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TPM4P67936 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TPM4P67936 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.7■□□□□ 0.74
TPM4P67936 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM4P67936 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms