Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AL049757.1-201ENST00000616842 1596 ntBASIC17.78■□□□□ 0.44
WNT3AP56704 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
WNT3AP56704 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
WNT3AP56704 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
WNT3AP56704 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.77■□□□□ 0.44
WNT3AP56704 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.77■□□□□ 0.44
WNT3AP56704 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
WNT3AP56704 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.77■□□□□ 0.44
WNT3AP56704 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 AC103564.2-201ENST00000432853 1299 ntBASIC17.77■□□□□ 0.44
WNT3AP56704 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.77■□□□□ 0.44
WNT3AP56704 IGHV3-52-201ENST00000519770 353 ntBASIC17.77■□□□□ 0.44
WNT3AP56704 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.77■□□□□ 0.44
WNT3AP56704 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.77■□□□□ 0.44
WNT3AP56704 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
WNT3AP56704 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WNT3AP56704 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
WNT3AP56704 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
WNT3AP56704 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
WNT3AP56704 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.77■□□□□ 0.43
WNT3AP56704 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
WNT3AP56704 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
WNT3AP56704 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
WNT3AP56704 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
WNT3AP56704 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.76■□□□□ 0.43
WNT3AP56704 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.76■□□□□ 0.43
WNT3AP56704 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.76■□□□□ 0.43
WNT3AP56704 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
WNT3AP56704 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
WNT3AP56704 KRT8P10-201ENST00000450021 1447 ntBASIC17.76■□□□□ 0.43
WNT3AP56704 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
WNT3AP56704 RCN1P2-201ENST00000398357 915 ntBASIC17.76■□□□□ 0.43
WNT3AP56704 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.76■□□□□ 0.43
WNT3AP56704 AC099336.1-202ENST00000602961 463 ntBASIC17.76■□□□□ 0.43
WNT3AP56704 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.76■□□□□ 0.43
WNT3AP56704 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.76■□□□□ 0.43
WNT3AP56704 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
WNT3AP56704 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
WNT3AP56704 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
WNT3AP56704 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.75■□□□□ 0.43
WNT3AP56704 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 INTS4P1-201ENST00000438455 1935 ntBASIC17.75■□□□□ 0.43
WNT3AP56704 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 AC108860.2-201ENST00000562760 2183 ntBASIC17.75■□□□□ 0.43
WNT3AP56704 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.75■□□□□ 0.43
WNT3AP56704 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.75■□□□□ 0.43
WNT3AP56704 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
WNT3AP56704 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.75■□□□□ 0.43
WNT3AP56704 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
WNT3AP56704 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.75■□□□□ 0.43
WNT3AP56704 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 AL023806.1-201ENST00000603994 1649 ntBASIC17.75■□□□□ 0.43
WNT3AP56704 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.75■□□□□ 0.43
WNT3AP56704 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
WNT3AP56704 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.75■□□□□ 0.43
WNT3AP56704 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
WNT3AP56704 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
WNT3AP56704 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
WNT3AP56704 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
WNT3AP56704 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms