Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.92■□□□□ 0.14
SUMO3P55854 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 RBM17P3-201ENST00000417687 1192 ntBASIC15.92■□□□□ 0.14
SUMO3P55854 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.92■□□□□ 0.14
SUMO3P55854 STK19B-204ENST00000512515 211 ntBASIC15.92■□□□□ 0.14
SUMO3P55854 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SUMO3P55854 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SUMO3P55854 AC046185.3-201ENST00000623228 1824 ntBASIC15.91■□□□□ 0.14
SUMO3P55854 AC132938.5-201ENST00000624980 1813 ntBASIC15.91■□□□□ 0.14
SUMO3P55854 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
SUMO3P55854 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.91■□□□□ 0.14
SUMO3P55854 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SUMO3P55854 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.91■□□□□ 0.14
SUMO3P55854 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.91■□□□□ 0.14
SUMO3P55854 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.91■□□□□ 0.14
SUMO3P55854 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.91■□□□□ 0.14
SUMO3P55854 AC106795.1-205ENST00000512851 1056 ntBASIC15.91■□□□□ 0.14
SUMO3P55854 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.91■□□□□ 0.14
SUMO3P55854 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.91■□□□□ 0.14
SUMO3P55854 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.91■□□□□ 0.14
SUMO3P55854 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.91■□□□□ 0.14
SUMO3P55854 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SUMO3P55854 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SUMO3P55854 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 PCDHB18P-201ENST00000524813 2368 ntBASIC15.9■□□□□ 0.14
SUMO3P55854 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
SUMO3P55854 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.9■□□□□ 0.14
SUMO3P55854 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.9■□□□□ 0.14
SUMO3P55854 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.9■□□□□ 0.14
SUMO3P55854 AC073592.4-201ENST00000623827 446 ntBASIC15.9■□□□□ 0.14
SUMO3P55854 SIGLEC16-201ENST00000599858 1437 ntBASIC15.9■□□□□ 0.14
SUMO3P55854 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
SUMO3P55854 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SUMO3P55854 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SUMO3P55854 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SUMO3P55854 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.89■□□□□ 0.13
SUMO3P55854 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.89■□□□□ 0.13
SUMO3P55854 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 AP005117.1-201ENST00000584346 1413 ntBASIC15.89■□□□□ 0.13
SUMO3P55854 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SUMO3P55854 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.89■□□□□ 0.13
SUMO3P55854 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.89■□□□□ 0.13
SUMO3P55854 SPDYE21P-201ENST00000413323 827 ntBASIC15.89■□□□□ 0.13
SUMO3P55854 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.89■□□□□ 0.13
SUMO3P55854 AL020989.1-201ENST00000422979 469 ntBASIC15.89■□□□□ 0.13
SUMO3P55854 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SUMO3P55854 AC132008.2-207ENST00000454517 770 ntBASIC15.89■□□□□ 0.13
SUMO3P55854 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.89■□□□□ 0.13
SUMO3P55854 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SUMO3P55854 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SUMO3P55854 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SUMO3P55854 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms