Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.51■□□□□ 0.23
SMSP52788 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.51■□□□□ 0.23
SMSP52788 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.51■□□□□ 0.23
SMSP52788 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.51■□□□□ 0.23
SMSP52788 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SMSP52788 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.5■□□□□ 0.23
SMSP52788 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 Z83836.1-201ENST00000624605 1642 ntBASIC16.5■□□□□ 0.23
SMSP52788 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 Z69720.1-201ENST00000601483 472 ntBASIC16.5■□□□□ 0.23
SMSP52788 AC010240.3-201ENST00000607688 395 ntBASIC16.5■□□□□ 0.23
SMSP52788 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 AC141586.5-201ENST00000624546 2050 ntBASIC16.5■□□□□ 0.23
SMSP52788 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMSP52788 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.5■□□□□ 0.23
SMSP52788 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.49■□□□□ 0.23
SMSP52788 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.49■□□□□ 0.23
SMSP52788 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.49■□□□□ 0.23
SMSP52788 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.49■□□□□ 0.23
SMSP52788 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 AL023806.1-201ENST00000603994 1649 ntBASIC16.49■□□□□ 0.23
SMSP52788 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMSP52788 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.49■□□□□ 0.23
SMSP52788 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.49■□□□□ 0.23
SMSP52788 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMSP52788 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMSP52788 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 VENTXP7-201ENST00000475503 772 ntBASIC16.49■□□□□ 0.23
SMSP52788 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 AC104390.1-201ENST00000555663 520 ntBASIC16.49■□□□□ 0.23
SMSP52788 AC074051.2-201ENST00000565115 352 ntBASIC16.49■□□□□ 0.23
SMSP52788 RNF126P1-202ENST00000569893 925 ntBASIC16.49■□□□□ 0.23
SMSP52788 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.49■□□□□ 0.23
SMSP52788 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMSP52788 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.49■□□□□ 0.23
SMSP52788 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.49■□□□□ 0.23
SMSP52788 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.49■□□□□ 0.23
SMSP52788 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 PP12613-201ENST00000424958 2230 ntBASIC16.49■□□□□ 0.23
SMSP52788 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMSP52788 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.48■□□□□ 0.23
SMSP52788 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.48■□□□□ 0.23
SMSP52788 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SMSP52788 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMSP52788 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.48■□□□□ 0.23
SMSP52788 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms