Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.43■□□□□ 0.54
CLCN4P51793 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLCN4P51793 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CLCN4P51793 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN4P51793 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.42■□□□□ 0.54
CLCN4P51793 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLCN4P51793 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.42■□□□□ 0.54
CLCN4P51793 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.42■□□□□ 0.54
CLCN4P51793 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.42■□□□□ 0.54
CLCN4P51793 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
CLCN4P51793 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.42■□□□□ 0.54
CLCN4P51793 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 BCAR1-209ENST00000546196 1340 ntBASIC18.42■□□□□ 0.54
CLCN4P51793 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCN4P51793 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLCN4P51793 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CLCN4P51793 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCN4P51793 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCN4P51793 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 LINC00982-205ENST00000420957 435 ntBASIC18.41■□□□□ 0.54
CLCN4P51793 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.41■□□□□ 0.54
CLCN4P51793 RHOQP3-201ENST00000437982 621 ntBASIC18.41■□□□□ 0.54
CLCN4P51793 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.41■□□□□ 0.54
CLCN4P51793 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCN4P51793 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLCN4P51793 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 KRT19P2-202ENST00000557173 1012 ntBASIC18.41■□□□□ 0.54
CLCN4P51793 AL031432.2-201ENST00000566714 459 ntBASIC18.41■□□□□ 0.54
CLCN4P51793 AL928711.1-201ENST00000570165 459 ntBASIC18.41■□□□□ 0.54
CLCN4P51793 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.41■□□□□ 0.54
CLCN4P51793 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCN4P51793 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLCN4P51793 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCN4P51793 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLCN4P51793 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CLCN4P51793 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLCN4P51793 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCN4P51793 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLCN4P51793 AP002472.1-201ENST00000577490 586 ntBASIC18.4■□□□□ 0.54
CLCN4P51793 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCN4P51793 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CLCN4P51793 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN4P51793 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCN4P51793 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CLCN4P51793 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCN4P51793 BICD1-207ENST00000551848 1962 ntBASIC18.4■□□□□ 0.54
CLCN4P51793 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms