Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 AC093458.2-201ENST00000623150 629 ntBASIC15.67■□□□□ 0.1
CSNK1A1P48729 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1A1P48729 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1A1P48729 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 MINOS1P3-201ENST00000457048 203 ntBASIC15.66■□□□□ 0.1
CSNK1A1P48729 AC091607.1-201ENST00000490318 1060 ntBASIC15.66■□□□□ 0.1
CSNK1A1P48729 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.66■□□□□ 0.1
CSNK1A1P48729 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CSNK1A1P48729 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1A1P48729 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 FAM220CP-201ENST00000395253 831 ntBASIC15.65■□□□□ 0.1
CSNK1A1P48729 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 AC009533.2-201ENST00000543664 586 ntBASIC15.65■□□□□ 0.1
CSNK1A1P48729 AP005901.3-202ENST00000581653 237 ntBASIC15.65■□□□□ 0.1
CSNK1A1P48729 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1A1P48729 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSNK1A1P48729 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CSNK1A1P48729 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1A1P48729 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1A1P48729 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms