Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.74■□□□□ 0.59
SSR1P43307 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 AP003733.1-201ENST00000491725 852 ntBASIC18.74■□□□□ 0.59
SSR1P43307 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.74■□□□□ 0.59
SSR1P43307 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SSR1P43307 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 FLJ16779-201ENST00000612722 7638 ntBASIC18.74■□□□□ 0.59
SSR1P43307 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSR1P43307 AC046158.3-201ENST00000624947 2558 ntBASIC18.74■□□□□ 0.59
SSR1P43307 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSR1P43307 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SSR1P43307 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 PP12613-201ENST00000424958 2230 ntBASIC18.73■□□□□ 0.59
SSR1P43307 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
SSR1P43307 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.73■□□□□ 0.59
SSR1P43307 HLA-F-220ENST00000434407 884 ntBASIC18.73■□□□□ 0.59
SSR1P43307 KRT18P38-201ENST00000449496 1282 ntBASIC18.73■□□□□ 0.59
SSR1P43307 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.73■□□□□ 0.59
SSR1P43307 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.73■□□□□ 0.59
SSR1P43307 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.73■□□□□ 0.59
SSR1P43307 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.73■□□□□ 0.59
SSR1P43307 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.73■□□□□ 0.59
SSR1P43307 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.73■□□□□ 0.59
SSR1P43307 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
SSR1P43307 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.73■□□□□ 0.59
SSR1P43307 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSR1P43307 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.73■□□□□ 0.59
SSR1P43307 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.73■□□□□ 0.59
SSR1P43307 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.73■□□□□ 0.59
SSR1P43307 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSR1P43307 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SSR1P43307 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR1P43307 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR1P43307 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SSR1P43307 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR1P43307 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR1P43307 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SSR1P43307 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 AC112907.2-201ENST00000448639 330 ntBASIC18.72■□□□□ 0.59
SSR1P43307 HOMER2P1-201ENST00000455653 964 ntBASIC18.72■□□□□ 0.59
SSR1P43307 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.72■□□□□ 0.59
SSR1P43307 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.72■□□□□ 0.59
SSR1P43307 AC006011.2-201ENST00000621313 1158 ntBASIC18.72■□□□□ 0.59
SSR1P43307 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SSR1P43307 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.72■□□□□ 0.59
SSR1P43307 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR1P43307 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR1P43307 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.72■□□□□ 0.59
SSR1P43307 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR1P43307 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR1P43307 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR1P43307 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SSR1P43307 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.71■□□□□ 0.59
SSR1P43307 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SSR1P43307 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSR1P43307 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSR1P43307 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SSR1P43307 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR1P43307 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR1P43307 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.71■□□□□ 0.59
SSR1P43307 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms