Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 STAU2-218ENST00000522061 564 ntTSL 46.38□□□□□ -1.399e-6■■□□□ 13
MATR3P43243 STAU2-206ENST00000519818 590 ntTSL 46.23□□□□□ -1.419e-6■■□□□ 13
MATR3P43243 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.479e-6■■□□□ 13
MATR3P43243 STAU2-222ENST00000522962 1041 ntTSL 35.86□□□□□ -1.479e-6■■□□□ 13
MATR3P43243 STAU2-227ENST00000524113 658 ntTSL 25.42□□□□□ -1.549e-6■■□□□ 13
MATR3P43243 STAU2-213ENST00000521447 727 ntTSL 54.58□□□□□ -1.689e-6■■□□□ 13
MATR3P43243 STAU2-209ENST00000520945 472 ntTSL 44.25□□□□□ -1.739e-6■■□□□ 13
MATR3P43243 TIMMDC1-209ENST00000498399 684 ntTSL 24.06□□□□□ -1.769e-6■■□□□ 13
MATR3P43243 STAU2-217ENST00000521845 546 ntTSL 53.65□□□□□ -1.839e-6■■□□□ 13
MATR3P43243 STAU2-211ENST00000521293 552 ntTSL 43.52□□□□□ -1.859e-6■■□□□ 13
MATR3P43243 ALMS1-203ENST00000476650 239 ntTSL 1 (best)2.53□□□□□ -29e-6■■□□□ 13
MATR3P43243 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.083e-7■■□□□ 13
MATR3P43243 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.79■■□□□ 1.083e-7■■□□□ 13
MATR3P43243 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.073e-7■■□□□ 13
MATR3P43243 C2orf42-212ENST00000470096 579 ntTSL 417.87■□□□□ 0.451e-8■■□□□ 13
MATR3P43243 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.78■□□□□ 0.441e-8■■□□□ 13
MATR3P43243 TIA1-210ENST00000474809 915 ntTSL 514.11□□□□□ -0.151e-8■■□□□ 13
MATR3P43243 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.41e-8■■□□□ 13
MATR3P43243 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC12.25□□□□□ -0.451e-8■■□□□ 13
MATR3P43243 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC10.29□□□□□ -0.761e-8■■□□□ 13
MATR3P43243 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.19□□□□□ -1.11e-8■■□□□ 13
MATR3P43243 TIA1-218ENST00000496096 511 ntTSL 37.7□□□□□ -1.181e-8■■□□□ 13
MATR3P43243 TIA1-209ENST00000474699 686 ntTSL 25.2□□□□□ -1.581e-8■■□□□ 13
MATR3P43243 TIA1-207ENST00000454815 911 ntTSL 54.1□□□□□ -1.751e-8■■□□□ 13
MATR3P43243 TIA1-212ENST00000477415 510 ntTSL 23.04□□□□□ -1.921e-8■■□□□ 13
MATR3P43243 TIA1-214ENST00000482876 562 ntTSL 53.04□□□□□ -1.921e-8■■□□□ 13
MATR3P43243 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.256e-6■■□□□ 13
MATR3P43243 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.036e-6■■□□□ 13
MATR3P43243 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.16e-6■■□□□ 13
MATR3P43243 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.66□□□□□ -1.186e-6■■□□□ 13
MATR3P43243 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.276e-6■■□□□ 13
MATR3P43243 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.17e-11■■□□□ 13
MATR3P43243 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.017e-11■■□□□ 13
MATR3P43243 KCMF1-204ENST00000456682 661 ntTSL 328.64■■■□□ 2.183e-6■■□□□ 13
MATR3P43243 KCMF1-202ENST00000428691 560 ntTSL 220.1■□□□□ 0.813e-6■■□□□ 13
MATR3P43243 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.793e-6■■□□□ 13
MATR3P43243 KCMF1-203ENST00000453448 625 ntTSL 35.95□□□□□ -1.463e-6■■□□□ 13
MATR3P43243 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.398e-7■■□□□ 13
MATR3P43243 SLC22A23-211ENST00000496753 561 ntTSL 412.91□□□□□ -0.344e-7■■□□□ 13
MATR3P43243 MCU-208ENST00000604372 894 ntTSL 1 (best)30.28■■■□□ 2.443e-6■■□□□ 12.9
MATR3P43243 SMAD4-213ENST00000591914 992 ntTSL 329.74■■■□□ 2.356e-9■■□□□ 12.9
MATR3P43243 GCC2-208ENST00000478207 543 ntTSL 326.27■■□□□ 1.83e-6■■□□□ 12.9
MATR3P43243 MAP2K4-211ENST00000602305 961 ntTSL 525.47■■□□□ 1.673e-6■■□□□ 12.9
MATR3P43243 MAP2K4-215ENST00000602811 1136 ntTSL 525.47■■□□□ 1.673e-6■■□□□ 12.9
MATR3P43243 FRMD5-205ENST00000451277 1994 ntTSL 525.28■■□□□ 1.643e-6■■□□□ 12.9
MATR3P43243 MAP2K4-213ENST00000602537 948 ntTSL 524.33■■□□□ 1.493e-6■■□□□ 12.9
MATR3P43243 PSPC1-204ENST00000492741 1709 ntTSL 224.14■■□□□ 1.453e-6■■□□□ 12.9
MATR3P43243 MAP2K4-212ENST00000602375 1064 ntTSL 524.03■■□□□ 1.443e-6■■□□□ 12.9
MATR3P43243 GRB14-205ENST00000488342 1983 ntTSL 523.74■■□□□ 1.393e-6■■□□□ 12.9
MATR3P43243 MAP2K4-207ENST00000582183 551 ntTSL 423.71■■□□□ 1.393e-6■■□□□ 12.9
MATR3P43243 MAP2K4-214ENST00000602686 977 ntTSL 523.11■■□□□ 1.293e-6■■□□□ 12.9
MATR3P43243 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.143e-6■■□□□ 12.9
MATR3P43243 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.113e-6■■□□□ 12.9
MATR3P43243 FRMD5-203ENST00000421674 2778 ntTSL 1 (best)21.93■■□□□ 1.13e-6■■□□□ 12.9
MATR3P43243 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.13e-6■■□□□ 12.9
MATR3P43243 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.87■■□□□ 1.093e-6■■□□□ 12.9
MATR3P43243 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.083e-6■■□□□ 12.9
MATR3P43243 TSPAN14-204ENST00000372157 855 ntTSL 521.74■■□□□ 1.073e-6■■□□□ 12.9
MATR3P43243 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.74■■□□□ 1.073e-6■■□□□ 12.9
MATR3P43243 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.016e-9■■□□□ 12.9
MATR3P43243 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.973e-6■■□□□ 12.9
MATR3P43243 PSPC1-203ENST00000471658 1647 ntTSL 1 (best)20.99■□□□□ 0.953e-6■■□□□ 12.9
MATR3P43243 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.926e-9■■□□□ 12.9
MATR3P43243 AHR-202ENST00000463496 4820 ntTSL 1 (best)20.63■□□□□ 0.893e-6■■□□□ 12.9
MATR3P43243 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.883e-6■■□□□ 12.9
MATR3P43243 AC091551.1-202ENST00000588256 526 ntTSL 420.39■□□□□ 0.856e-9■■□□□ 12.9
MATR3P43243 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.38■□□□□ 0.853e-6■■□□□ 12.9
MATR3P43243 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.833e-6■■□□□ 12.9
MATR3P43243 LDLRAD4-215ENST00000590371 598 ntTSL 220.15■□□□□ 0.823e-6■■□□□ 12.9
MATR3P43243 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.56■□□□□ 0.723e-6■■□□□ 12.9
MATR3P43243 TSPAN14-208ENST00000469149 959 ntTSL 219.49■□□□□ 0.713e-6■■□□□ 12.9
MATR3P43243 PPP6R2-206ENST00000427222 1811 ntTSL 519.48■□□□□ 0.713e-6■■□□□ 12.9
MATR3P43243 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.73e-6■■□□□ 12.9
MATR3P43243 FRG1HP-202ENST00000611606 945 ntTSL 1 (best)19.28■□□□□ 0.683e-6■■□□□ 12.9
MATR3P43243 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.663e-6■■□□□ 12.9
MATR3P43243 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.633e-6■■□□□ 12.9
MATR3P43243 SCAF11-206ENST00000474828 757 ntTSL 218.42■□□□□ 0.543e-6■■□□□ 12.9
MATR3P43243 DHRS4-AS1-202ENST00000553454 1492 ntTSL 1 (best)18.28■□□□□ 0.523e-6■■□□□ 12.9
MATR3P43243 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.513e-6■■□□□ 12.9
MATR3P43243 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.88■□□□□ 0.453e-6■■□□□ 12.9
MATR3P43243 GRB14-203ENST00000446413 1435 ntTSL 1 (best)17.14■□□□□ 0.333e-6■■□□□ 12.9
MATR3P43243 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.84■□□□□ 0.293e-6■■□□□ 12.9
MATR3P43243 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.66■□□□□ 0.263e-6■■□□□ 12.9
MATR3P43243 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.57■□□□□ 0.243e-6■■□□□ 12.9
MATR3P43243 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.47■□□□□ 0.233e-6■■□□□ 12.9
MATR3P43243 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.42■□□□□ 0.223e-6■■□□□ 12.9
MATR3P43243 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.223e-6■■□□□ 12.9
MATR3P43243 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.213e-6■■□□□ 12.9
MATR3P43243 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.193e-6■■□□□ 12.9
MATR3P43243 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.181e-6■■□□□ 12.9
MATR3P43243 PPFIBP1-210ENST00000540114 2645 ntTSL 216.12■□□□□ 0.173e-6■■□□□ 12.9
MATR3P43243 BRMS1L-202ENST00000547420 650 ntTSL 315.86■□□□□ 0.133e-6■■□□□ 12.9
MATR3P43243 B3GNTL1-208ENST00000572977 2446 ntTSL 215.75■□□□□ 0.113e-6■■□□□ 12.9
MATR3P43243 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.74■□□□□ 0.113e-6■■□□□ 12.9
MATR3P43243 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.56■□□□□ 0.083e-6■■□□□ 12.9
MATR3P43243 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.38■□□□□ 0.053e-6■■□□□ 12.9
MATR3P43243 FRG1HP-205ENST00000618340 830 ntTSL 215.23■□□□□ 0.033e-6■■□□□ 12.9
MATR3P43243 NEDD4L-215ENST00000586268 830 ntTSL 315.17■□□□□ 0.023e-6■■□□□ 12.9
MATR3P43243 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.013e-6■■□□□ 12.9
MATR3P43243 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.013e-6■■□□□ 12.9
Retrieved 100 of 16,209 protein–RNA pairs in 83.8 ms