RNA–Protein interactions for RNA: ENST00000498399.1

TIMMDC1-209, Transcript of translocase of inner mitochondrial membrane domain containing 1, humanhuman

TSL 2

Gene TIMMDC1, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1-209ENST00000498399 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
TIMMDC1-209ENST00000498399 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
TIMMDC1-209ENST00000498399 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
TIMMDC1-209ENST00000498399 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
TIMMDC1-209ENST00000498399 FOXD1Q16676 465 aa19.26■□□□□ 0.67
TIMMDC1-209ENST00000498399 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
TIMMDC1-209ENST00000498399 MSH5O43196 834 aa18.1■□□□□ 0.49
TIMMDC1-209ENST00000498399 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
TIMMDC1-209ENST00000498399 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
TIMMDC1-209ENST00000498399 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
TIMMDC1-209ENST00000498399 ADRA2BP18089 450 aa17.8■□□□□ 0.44
TIMMDC1-209ENST00000498399 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
TIMMDC1-209ENST00000498399 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
TIMMDC1-209ENST00000498399 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
TIMMDC1-209ENST00000498399 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
TIMMDC1-209ENST00000498399 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
TIMMDC1-209ENST00000498399 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
TIMMDC1-209ENST00000498399 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
TIMMDC1-209ENST00000498399 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
TIMMDC1-209ENST00000498399 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
TIMMDC1-209ENST00000498399 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
TIMMDC1-209ENST00000498399 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
TIMMDC1-209ENST00000498399 KCNA4P22459 653 aa15.41■□□□□ 0.06
TIMMDC1-209ENST00000498399 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
TIMMDC1-209ENST00000498399 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
TIMMDC1-209ENST00000498399 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
TIMMDC1-209ENST00000498399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
TIMMDC1-209ENST00000498399 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
TIMMDC1-209ENST00000498399 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
TIMMDC1-209ENST00000498399 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
TIMMDC1-209ENST00000498399 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
TIMMDC1-209ENST00000498399 DSG3P32926 999 aa14.4□□□□□ -0.1
TIMMDC1-209ENST00000498399 CAPN15O75808 1086 aa14.36□□□□□ -0.11
TIMMDC1-209ENST00000498399 APLP2Q06481 763 aa14.22□□□□□ -0.13
TIMMDC1-209ENST00000498399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
TIMMDC1-209ENST00000498399 ZBTB22O15209 634 aa14.18□□□□□ -0.14
TIMMDC1-209ENST00000498399 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
TIMMDC1-209ENST00000498399 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
TIMMDC1-209ENST00000498399 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
TIMMDC1-209ENST00000498399 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
TIMMDC1-209ENST00000498399 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
TIMMDC1-209ENST00000498399 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
TIMMDC1-209ENST00000498399 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
TIMMDC1-209ENST00000498399 ABCB7O75027 752 aa14.03□□□□□ -0.16
TIMMDC1-209ENST00000498399 POTEHQ6S545 545 aa13.94□□□□□ -0.18
TIMMDC1-209ENST00000498399 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
TIMMDC1-209ENST00000498399 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
TIMMDC1-209ENST00000498399 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
TIMMDC1-209ENST00000498399 POLA2Q14181 598 aa13.72□□□□□ -0.21
TIMMDC1-209ENST00000498399 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
TIMMDC1-209ENST00000498399 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
TIMMDC1-209ENST00000498399 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
TIMMDC1-209ENST00000498399 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
TIMMDC1-209ENST00000498399 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
TIMMDC1-209ENST00000498399 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
TIMMDC1-209ENST00000498399 FBLN2P98095 1184 aa13.15□□□□□ -0.3
TIMMDC1-209ENST00000498399 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
TIMMDC1-209ENST00000498399 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
TIMMDC1-209ENST00000498399 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
TIMMDC1-209ENST00000498399 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
TIMMDC1-209ENST00000498399 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
TIMMDC1-209ENST00000498399 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
TIMMDC1-209ENST00000498399 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
TIMMDC1-209ENST00000498399 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
TIMMDC1-209ENST00000498399 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
TIMMDC1-209ENST00000498399 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
TIMMDC1-209ENST00000498399 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
TIMMDC1-209ENST00000498399 HAX1O00165 279 aa12.82□□□□□ -0.36
TIMMDC1-209ENST00000498399 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
TIMMDC1-209ENST00000498399 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
TIMMDC1-209ENST00000498399 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
TIMMDC1-209ENST00000498399 EVX2Q03828 476 aa12.72□□□□□ -0.37
TIMMDC1-209ENST00000498399 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
TIMMDC1-209ENST00000498399 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
TIMMDC1-209ENST00000498399 FKBP8Q14318 412 aa12.64□□□□□ -0.39
TIMMDC1-209ENST00000498399 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
TIMMDC1-209ENST00000498399 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
TIMMDC1-209ENST00000498399 PROM2Q8N271 834 aa12.44□□□□□ -0.42
TIMMDC1-209ENST00000498399 GABBR2O75899 941 aa12.43□□□□□ -0.42
TIMMDC1-209ENST00000498399 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.42
TIMMDC1-209ENST00000498399 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
TIMMDC1-209ENST00000498399 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
TIMMDC1-209ENST00000498399 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
TIMMDC1-209ENST00000498399 CLCN6P51797 869 aa12.28□□□□□ -0.44
TIMMDC1-209ENST00000498399 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
TIMMDC1-209ENST00000498399 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
TIMMDC1-209ENST00000498399 LHX8Q68G74 356 aa12.18□□□□□ -0.46
TIMMDC1-209ENST00000498399 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
TIMMDC1-209ENST00000498399 MIER1Q8N108 512 aa12.14□□□□□ -0.47
TIMMDC1-209ENST00000498399 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
TIMMDC1-209ENST00000498399 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
TIMMDC1-209ENST00000498399 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
TIMMDC1-209ENST00000498399 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
TIMMDC1-209ENST00000498399 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
TIMMDC1-209ENST00000498399 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
TIMMDC1-209ENST00000498399 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
TIMMDC1-209ENST00000498399 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
TIMMDC1-209ENST00000498399 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
TIMMDC1-209ENST00000498399 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
TIMMDC1-209ENST00000498399 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms