RNA–Protein interactions for RNA: ENST00000453448.1

KCMF1-203, Transcript of potassium channel modulatory factor 1, humanhuman

TSL 3

Gene KCMF1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-203ENST00000453448 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
KCMF1-203ENST00000453448 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
KCMF1-203ENST00000453448 SENP3Q9H4L4 574 aaPredicted RBP14.25□□□□□ -0.13
KCMF1-203ENST00000453448 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
KCMF1-203ENST00000453448 FOXD1Q16676 465 aa13.25□□□□□ -0.29
KCMF1-203ENST00000453448 PLPPR3Q6T4P5 718 aa12.76□□□□□ -0.37
KCMF1-203ENST00000453448 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
KCMF1-203ENST00000453448 MSH5O43196 834 aa12.41□□□□□ -0.42
KCMF1-203ENST00000453448 ADRA2BP18089 450 aa12.41□□□□□ -0.42
KCMF1-203ENST00000453448 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
KCMF1-203ENST00000453448 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
KCMF1-203ENST00000453448 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
KCMF1-203ENST00000453448 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
KCMF1-203ENST00000453448 DMRT2Q9Y5R5 561 aa11.29□□□□□ -0.6
KCMF1-203ENST00000453448 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
KCMF1-203ENST00000453448 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
KCMF1-203ENST00000453448 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
KCMF1-203ENST00000453448 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
KCMF1-203ENST00000453448 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
KCMF1-203ENST00000453448 KCNA4P22459 653 aa10.86□□□□□ -0.67
KCMF1-203ENST00000453448 RNF216Q9NWF9 866 aaPredicted RBP10.83□□□□□ -0.68
KCMF1-203ENST00000453448 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
KCMF1-203ENST00000453448 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
KCMF1-203ENST00000453448 NPM3O75607 178 aaKnown RBP10.61□□□□□ -0.71
KCMF1-203ENST00000453448 RNF39Q9H2S5 420 aa10.56□□□□□ -0.72
KCMF1-203ENST00000453448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.74
KCMF1-203ENST00000453448 DNAJC5BQ9UF47 199 aa10.45□□□□□ -0.74
KCMF1-203ENST00000453448 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
KCMF1-203ENST00000453448 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
KCMF1-203ENST00000453448 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
KCMF1-203ENST00000453448 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
KCMF1-203ENST00000453448 CSRNP3Q8WYN3 585 aa10.13□□□□□ -0.79
KCMF1-203ENST00000453448 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
KCMF1-203ENST00000453448 CAPN15O75808 1086 aa10.06□□□□□ -0.8
KCMF1-203ENST00000453448 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
KCMF1-203ENST00000453448 ZBTB22O15209 634 aa10.01□□□□□ -0.81
KCMF1-203ENST00000453448 APLP2Q06481 763 aa9.97□□□□□ -0.81
KCMF1-203ENST00000453448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.95□□□□□ -0.82
KCMF1-203ENST00000453448 HNRNPUL2Q1KMD3 747 aaKnown RBP9.95□□□□□ -0.82
KCMF1-203ENST00000453448 DSG3P32926 999 aa9.92□□□□□ -0.82
KCMF1-203ENST00000453448 FOXD4L1Q9NU39 408 aa9.92□□□□□ -0.82
KCMF1-203ENST00000453448 TRHP20396 242 aaPredicted RBP9.91□□□□□ -0.82
KCMF1-203ENST00000453448 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
KCMF1-203ENST00000453448 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
KCMF1-203ENST00000453448 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
KCMF1-203ENST00000453448 ABCB7O75027 752 aa9.83□□□□□ -0.84
KCMF1-203ENST00000453448 POLA2Q14181 598 aa9.61□□□□□ -0.87
KCMF1-203ENST00000453448 ATF5Q9Y2D1 282 aaPredicted RBP9.57□□□□□ -0.88
KCMF1-203ENST00000453448 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
KCMF1-203ENST00000453448 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
KCMF1-203ENST00000453448 CCDC180Q9P1Z9 1646 aa9.49□□□□□ -0.89
KCMF1-203ENST00000453448 ZBTB12Q9Y330 459 aaPredicted RBP9.45□□□□□ -0.9
KCMF1-203ENST00000453448 POTEHQ6S545 545 aa9.42□□□□□ -0.9
KCMF1-203ENST00000453448 ZCCHC6Q5VYS8 1495 aaKnown RBP9.41□□□□□ -0.9
KCMF1-203ENST00000453448 OSCARQ8IYS5 282 aa9.34□□□□□ -0.91
KCMF1-203ENST00000453448 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
KCMF1-203ENST00000453448 FBLN2P98095 1184 aa9.27□□□□□ -0.93
KCMF1-203ENST00000453448 AKT1S1Q96B36 256 aa9.27□□□□□ -0.93
KCMF1-203ENST00000453448 CHRDL2Q6WN34 429 aa9.26□□□□□ -0.93
KCMF1-203ENST00000453448 SHROOM4Q9ULL8 1493 aa9.23□□□□□ -0.93
KCMF1-203ENST00000453448 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
KCMF1-203ENST00000453448 REM2Q8IYK8 340 aaPredicted RBP9.18□□□□□ -0.94
KCMF1-203ENST00000453448 SPDYE2BA6NHP3 402 aa9.14□□□□□ -0.95
KCMF1-203ENST00000453448 SPDYE6P0CI01 402 aa9.14□□□□□ -0.95
KCMF1-203ENST00000453448 SPDYE2Q495Y8 402 aa9.14□□□□□ -0.95
KCMF1-203ENST00000453448 MKRN4PQ13434 485 aaPredicted RBP9.13□□□□□ -0.95
KCMF1-203ENST00000453448 FKBP8Q14318 412 aa9.13□□□□□ -0.95
KCMF1-203ENST00000453448 PITPNM1O00562 1244 aa9.1□□□□□ -0.95
KCMF1-203ENST00000453448 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
KCMF1-203ENST00000453448 MYO15BQ96JP2 1530 aa9.09□□□□□ -0.95
KCMF1-203ENST00000453448 ZNF692Q9BU19 519 aaPredicted RBP9.07□□□□□ -0.96
KCMF1-203ENST00000453448 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
KCMF1-203ENST00000453448 CLEC11AQ9Y240 323 aa9.01□□□□□ -0.97
KCMF1-203ENST00000453448 SSUH2Q9Y2M2 353 aa9□□□□□ -0.97
KCMF1-203ENST00000453448 SPDYE1Q8NFV5 336 aaPredicted RBP8.98□□□□□ -0.97
KCMF1-203ENST00000453448 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.97
KCMF1-203ENST00000453448 PABPN1Q86U42 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
KCMF1-203ENST00000453448 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
KCMF1-203ENST00000453448 HAX1O00165 279 aa8.9□□□□□ -0.98
KCMF1-203ENST00000453448 PRKAR2AP13861 404 aaKnown RBP8.88□□□□□ -0.99
KCMF1-203ENST00000453448 SP7Q8TDD2 431 aaPredicted RBP8.86□□□□□ -0.99
KCMF1-203ENST00000453448 NACADO15069 1562 aa8.84□□□□□ -0.99
KCMF1-203ENST00000453448 PRR29P0C7W0 189 aa8.84□□□□□ -0.99
KCMF1-203ENST00000453448 ABCC9O60706 1549 aa8.84□□□□□ -0.99
KCMF1-203ENST00000453448 HRCP23327 699 aa8.83□□□□□ -1
KCMF1-203ENST00000453448 RSF1Q96T23 1441 aaPredicted RBP8.8□□□□□ -1
KCMF1-203ENST00000453448 CHADLQ6NUI6 762 aa8.8□□□□□ -1
KCMF1-203ENST00000453448 PROM2Q8N271 834 aa8.79□□□□□ -1
KCMF1-203ENST00000453448 RB1CC1Q8TDY2 1594 aa8.73□□□□□ -1.01
KCMF1-203ENST00000453448 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
KCMF1-203ENST00000453448 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
KCMF1-203ENST00000453448 ZEB1P37275 1124 aaPredicted RBP8.72□□□□□ -1.01
KCMF1-203ENST00000453448 EVX2Q03828 476 aa8.72□□□□□ -1.01
KCMF1-203ENST00000453448 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
KCMF1-203ENST00000453448 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
KCMF1-203ENST00000453448 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.02
KCMF1-203ENST00000453448 PCGF6Q9BYE7 350 aa8.7□□□□□ -1.02
KCMF1-203ENST00000453448 STAG3Q9UJ98 1225 aa8.7□□□□□ -1.02
KCMF1-203ENST00000453448 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
KCMF1-203ENST00000453448 C19orf67A6NJJ6 358 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms