RNA–Protein interactions for RNA: ENST00000476650.2

ALMS1-203, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 239 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-203ENST00000476650 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
ALMS1-203ENST00000476650 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
ALMS1-203ENST00000476650 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
ALMS1-203ENST00000476650 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
ALMS1-203ENST00000476650 FOXD1Q16676 465 aa16.78■□□□□ 0.28
ALMS1-203ENST00000476650 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
ALMS1-203ENST00000476650 ADRA2BP18089 450 aa15.87■□□□□ 0.13
ALMS1-203ENST00000476650 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
ALMS1-203ENST00000476650 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
ALMS1-203ENST00000476650 MSH5O43196 834 aa15.63■□□□□ 0.09
ALMS1-203ENST00000476650 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
ALMS1-203ENST00000476650 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
ALMS1-203ENST00000476650 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
ALMS1-203ENST00000476650 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
ALMS1-203ENST00000476650 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
ALMS1-203ENST00000476650 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
ALMS1-203ENST00000476650 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
ALMS1-203ENST00000476650 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
ALMS1-203ENST00000476650 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
ALMS1-203ENST00000476650 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
ALMS1-203ENST00000476650 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
ALMS1-203ENST00000476650 KCNA4P22459 653 aa13.63□□□□□ -0.23
ALMS1-203ENST00000476650 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
ALMS1-203ENST00000476650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
ALMS1-203ENST00000476650 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
ALMS1-203ENST00000476650 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
ALMS1-203ENST00000476650 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
ALMS1-203ENST00000476650 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
ALMS1-203ENST00000476650 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
ALMS1-203ENST00000476650 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
ALMS1-203ENST00000476650 CAPN15O75808 1086 aa12.81□□□□□ -0.36
ALMS1-203ENST00000476650 SPINK5Q9NQ38 1064 aaPredicted RBP12.78□□□□□ -0.36
ALMS1-203ENST00000476650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
ALMS1-203ENST00000476650 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
ALMS1-203ENST00000476650 APLP2Q06481 763 aa12.7□□□□□ -0.38
ALMS1-203ENST00000476650 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
ALMS1-203ENST00000476650 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
ALMS1-203ENST00000476650 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
ALMS1-203ENST00000476650 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
ALMS1-203ENST00000476650 DSG3P32926 999 aa12.58□□□□□ -0.4
ALMS1-203ENST00000476650 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
ALMS1-203ENST00000476650 ABCB7O75027 752 aa12.53□□□□□ -0.4
ALMS1-203ENST00000476650 ZBTB22O15209 634 aa12.49□□□□□ -0.41
ALMS1-203ENST00000476650 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
ALMS1-203ENST00000476650 POLA2Q14181 598 aa12.32□□□□□ -0.44
ALMS1-203ENST00000476650 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
ALMS1-203ENST00000476650 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
ALMS1-203ENST00000476650 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
ALMS1-203ENST00000476650 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
ALMS1-203ENST00000476650 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
ALMS1-203ENST00000476650 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
ALMS1-203ENST00000476650 FBLN2P98095 1184 aa11.91□□□□□ -0.5
ALMS1-203ENST00000476650 AKT1S1Q96B36 256 aa11.78□□□□□ -0.52
ALMS1-203ENST00000476650 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
ALMS1-203ENST00000476650 POTEHQ6S545 545 aa11.74□□□□□ -0.53
ALMS1-203ENST00000476650 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
ALMS1-203ENST00000476650 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
ALMS1-203ENST00000476650 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
ALMS1-203ENST00000476650 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
ALMS1-203ENST00000476650 REM2Q8IYK8 340 aaPredicted RBP11.68□□□□□ -0.54
ALMS1-203ENST00000476650 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
ALMS1-203ENST00000476650 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
ALMS1-203ENST00000476650 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.57
ALMS1-203ENST00000476650 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
ALMS1-203ENST00000476650 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
ALMS1-203ENST00000476650 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
ALMS1-203ENST00000476650 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
ALMS1-203ENST00000476650 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
ALMS1-203ENST00000476650 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
ALMS1-203ENST00000476650 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
ALMS1-203ENST00000476650 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
ALMS1-203ENST00000476650 HAX1O00165 279 aa11.25□□□□□ -0.61
ALMS1-203ENST00000476650 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
ALMS1-203ENST00000476650 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
ALMS1-203ENST00000476650 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
ALMS1-203ENST00000476650 FKBP8Q14318 412 aa11.07□□□□□ -0.64
ALMS1-203ENST00000476650 EVX2Q03828 476 aa11.04□□□□□ -0.64
ALMS1-203ENST00000476650 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
ALMS1-203ENST00000476650 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
ALMS1-203ENST00000476650 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
ALMS1-203ENST00000476650 PROM2Q8N271 834 aa11□□□□□ -0.65
ALMS1-203ENST00000476650 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
ALMS1-203ENST00000476650 MIER1Q8N108 512 aa10.89□□□□□ -0.67
ALMS1-203ENST00000476650 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
ALMS1-203ENST00000476650 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
ALMS1-203ENST00000476650 ZRANB1Q9UGI0 708 aa10.85□□□□□ -0.67
ALMS1-203ENST00000476650 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
ALMS1-203ENST00000476650 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
ALMS1-203ENST00000476650 GABBR2O75899 941 aa10.82□□□□□ -0.68
ALMS1-203ENST00000476650 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
ALMS1-203ENST00000476650 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
ALMS1-203ENST00000476650 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
ALMS1-203ENST00000476650 ZNF579Q8NAF0 562 aaKnown RBP10.72□□□□□ -0.69
ALMS1-203ENST00000476650 PHF12Q96QT6 1004 aa10.7□□□□□ -0.7
ALMS1-203ENST00000476650 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
ALMS1-203ENST00000476650 CLCN6P51797 869 aa10.67□□□□□ -0.7
ALMS1-203ENST00000476650 DCBLD2Q96PD2 775 aa10.65□□□□□ -0.7
ALMS1-203ENST00000476650 GALR2O43603 387 aaPredicted RBP10.63□□□□□ -0.71
ALMS1-203ENST00000476650 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
ALMS1-203ENST00000476650 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms