RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 CHIC1Q5VXU3 224 aa11.67□□□□□ -0.54
BRIP1-202ENST00000577598 EHMT2Q96KQ7 1210 aa11.58□□□□□ -0.56
BRIP1-202ENST00000577598 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
BRIP1-202ENST00000577598 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
BRIP1-202ENST00000577598 PLPPR3Q6T4P5 718 aa10.76□□□□□ -0.69
BRIP1-202ENST00000577598 PHF23Q9BUL5 403 aaPredicted RBP10.61□□□□□ -0.71
BRIP1-202ENST00000577598 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
BRIP1-202ENST00000577598 KCNA4P22459 653 aa10.36□□□□□ -0.75
BRIP1-202ENST00000577598 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
BRIP1-202ENST00000577598 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
BRIP1-202ENST00000577598 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
BRIP1-202ENST00000577598 ADRA2BP18089 450 aa9.95□□□□□ -0.82
BRIP1-202ENST00000577598 AMER1Q5JTC6 1135 aaPredicted RBP9.87□□□□□ -0.83
BRIP1-202ENST00000577598 DCAF8L2P0C7V8 631 aa9.82□□□□□ -0.84
BRIP1-202ENST00000577598 TULP1O00294 542 aaPredicted RBP9.65□□□□□ -0.86
BRIP1-202ENST00000577598 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
BRIP1-202ENST00000577598 NCBP3Q53F19 620 aaKnown RBP9.63□□□□□ -0.87
BRIP1-202ENST00000577598 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
BRIP1-202ENST00000577598 DAXXQ9UER7 740 aaPredicted RBP9.55□□□□□ -0.88
BRIP1-202ENST00000577598 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
BRIP1-202ENST00000577598 FKBP8Q14318 412 aa9.5□□□□□ -0.89
BRIP1-202ENST00000577598 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
BRIP1-202ENST00000577598 ZBTB22O15209 634 aa9.44□□□□□ -0.9
BRIP1-202ENST00000577598 RANGAP1P46060 587 aaPredicted RBP9.37□□□□□ -0.91
BRIP1-202ENST00000577598 PPP6R1Q9UPN7 881 aa9.35□□□□□ -0.91
BRIP1-202ENST00000577598 BCANQ96GW7 911 aa9.33□□□□□ -0.92
BRIP1-202ENST00000577598 PODXL2Q9NZ53 605 aa9.31□□□□□ -0.92
BRIP1-202ENST00000577598 NPM3O75607 178 aaKnown RBP9.27□□□□□ -0.93
BRIP1-202ENST00000577598 SUPT5HO00267 1087 aaKnown RBP9.26□□□□□ -0.93
BRIP1-202ENST00000577598 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
BRIP1-202ENST00000577598 SENP3Q9H4L4 574 aaPredicted RBP9.16□□□□□ -0.94
BRIP1-202ENST00000577598 PPP4R3CPQ6ZMV5 832 aa9.14□□□□□ -0.95
BRIP1-202ENST00000577598 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
BRIP1-202ENST00000577598 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
BRIP1-202ENST00000577598 FBLN2P98095 1184 aa9.11□□□□□ -0.95
BRIP1-202ENST00000577598 KLHL34Q8N239 644 aa9.1□□□□□ -0.95
BRIP1-202ENST00000577598 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
BRIP1-202ENST00000577598 GTF3C3Q9Y5Q9 886 aa9.09□□□□□ -0.95
BRIP1-202ENST00000577598 ARXQ96QS3 562 aa9.05□□□□□ -0.96
BRIP1-202ENST00000577598 ARID3AQ99856 593 aa9.04□□□□□ -0.96
BRIP1-202ENST00000577598 PAXIP1Q6ZW49 1069 aaPredicted RBP8.95□□□□□ -0.98
BRIP1-202ENST00000577598 KDM2AQ9Y2K7 1162 aa8.92□□□□□ -0.98
BRIP1-202ENST00000577598 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
BRIP1-202ENST00000577598 ERICH6Q7L0X2 663 aa8.88□□□□□ -0.99
BRIP1-202ENST00000577598 NBR1Q14596 966 aa8.88□□□□□ -0.99
BRIP1-202ENST00000577598 FOXD4L1Q9NU39 408 aa8.87□□□□□ -0.99
BRIP1-202ENST00000577598 UBTFP17480 764 aaKnown RBP8.81□□□□□ -1
BRIP1-202ENST00000577598 TRIM26Q12899 539 aaPredicted RBP8.78□□□□□ -1
BRIP1-202ENST00000577598 PELP1Q8IZL8 1130 aaKnown RBP8.77□□□□□ -1.01
BRIP1-202ENST00000577598 TMEM132AQ24JP5 1023 aa8.76□□□□□ -1.01
BRIP1-202ENST00000577598 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
BRIP1-202ENST00000577598 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
BRIP1-202ENST00000577598 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
BRIP1-202ENST00000577598 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-202ENST00000577598 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
BRIP1-202ENST00000577598 PIAS4Q8N2W9 510 aaPredicted RBP8.7□□□□□ -1.02
BRIP1-202ENST00000577598 FOXD1Q16676 465 aa8.66□□□□□ -1.02
BRIP1-202ENST00000577598 MYT1Q01538 1121 aa8.59□□□□□ -1.03
BRIP1-202ENST00000577598 PLEKHG5O94827 1062 aa8.56□□□□□ -1.04
BRIP1-202ENST00000577598 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
BRIP1-202ENST00000577598 APLP2Q06481 763 aa8.52□□□□□ -1.05
BRIP1-202ENST00000577598 POLR3GLQ9BT43 218 aa8.52□□□□□ -1.05
BRIP1-202ENST00000577598 ARID3CA6NKF2 412 aa8.51□□□□□ -1.05
BRIP1-202ENST00000577598 CHGAP10645 457 aaKnown RBP8.51□□□□□ -1.05
BRIP1-202ENST00000577598 NPM1P06748 294 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRIP1-202ENST00000577598 SPRYD3Q8NCJ5 442 aa8.47□□□□□ -1.05
BRIP1-202ENST00000577598 HRCP23327 699 aa8.46□□□□□ -1.05
BRIP1-202ENST00000577598 ECM2O94769 699 aaPredicted RBP8.46□□□□□ -1.06
BRIP1-202ENST00000577598 MYT1LQ9UL68 1186 aa8.45□□□□□ -1.06
BRIP1-202ENST00000577598 MAPK8IP2Q13387 824 aaPredicted RBP8.45□□□□□ -1.06
BRIP1-202ENST00000577598 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
BRIP1-202ENST00000577598 LOC105371045A0A1W2PR82 267 aa8.44□□□□□ -1.06
BRIP1-202ENST00000577598 PKD2Q13563 968 aa8.41□□□□□ -1.06
BRIP1-202ENST00000577598 IFNLR1Q8IU57 520 aaPredicted RBP8.39□□□□□ -1.07
BRIP1-202ENST00000577598 VASPP50552 380 aaPredicted RBP8.38□□□□□ -1.07
BRIP1-202ENST00000577598 CNKSR2Q8WXI2 1034 aa8.37□□□□□ -1.07
BRIP1-202ENST00000577598 TTBK1Q5TCY1 1321 aaPredicted RBP8.36□□□□□ -1.07
BRIP1-202ENST00000577598 FAM9AQ8IZU1 332 aaPredicted RBP8.36□□□□□ -1.07
BRIP1-202ENST00000577598 ZNF428Q96B54 188 aa8.34□□□□□ -1.07
BRIP1-202ENST00000577598 AEBP1Q8IUX7 1158 aa8.34□□□□□ -1.07
BRIP1-202ENST00000577598 DCAF8L1A6NGE4 600 aa8.33□□□□□ -1.08
BRIP1-202ENST00000577598 RGL2O15211 777 aa8.32□□□□□ -1.08
BRIP1-202ENST00000577598 CIZ1Q9ULV3 898 aaPredicted RBP8.32□□□□□ -1.08
BRIP1-202ENST00000577598 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
BRIP1-202ENST00000577598 CDK11AQ9UQ88 783 aaPredicted RBP8.31□□□□□ -1.08
BRIP1-202ENST00000577598 ATF5Q9Y2D1 282 aaPredicted RBP8.28□□□□□ -1.08
BRIP1-202ENST00000577598 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
BRIP1-202ENST00000577598 RBM25P49756 843 aaKnown RBP8.28□□□□□ -1.08
BRIP1-202ENST00000577598 DHX37Q8IY37 1157 aaKnown RBP8.27□□□□□ -1.09
BRIP1-202ENST00000577598 BBXQ8WY36 941 aaPredicted RBP8.27□□□□□ -1.09
BRIP1-202ENST00000577598 FBXO3Q9UK99 471 aa8.27□□□□□ -1.09
BRIP1-202ENST00000577598 APBB1O00213 710 aa8.26□□□□□ -1.09
BRIP1-202ENST00000577598 CCDC9Q9Y3X0 531 aaKnown RBP8.26□□□□□ -1.09
BRIP1-202ENST00000577598 SLC4A2P04920 1241 aa8.25□□□□□ -1.09
BRIP1-202ENST00000577598 USP35Q9P2H5 1018 aa8.25□□□□□ -1.09
BRIP1-202ENST00000577598 IGSF3O75054 1194 aa8.24□□□□□ -1.09
BRIP1-202ENST00000577598 FOXD4L5Q5VV16 416 aaPredicted RBP8.24□□□□□ -1.09
BRIP1-202ENST00000577598 FOXD4L4Q8WXT5 416 aaPredicted RBP8.24□□□□□ -1.09
BRIP1-202ENST00000577598 RAD21O60216 631 aa8.23□□□□□ -1.09
BRIP1-202ENST00000577598 PDIA4P13667 645 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms