Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
COPB2P35606 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 AP002414.1-201ENST00000391405 1147 ntBASIC20.04■□□□□ 0.8
COPB2P35606 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.04■□□□□ 0.8
COPB2P35606 AP006288.1-201ENST00000446065 395 ntBASIC20.04■□□□□ 0.8
COPB2P35606 KRT18P2-201ENST00000447938 1258 ntBASIC20.04■□□□□ 0.8
COPB2P35606 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COPB2P35606 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COPB2P35606 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COPB2P35606 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.04■□□□□ 0.8
COPB2P35606 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.04■□□□□ 0.8
COPB2P35606 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.03■□□□□ 0.8
COPB2P35606 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COPB2P35606 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COPB2P35606 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.03■□□□□ 0.8
COPB2P35606 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.03■□□□□ 0.8
COPB2P35606 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 MRPL20P1-201ENST00000400819 433 ntBASIC20.03■□□□□ 0.8
COPB2P35606 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.03■□□□□ 0.8
COPB2P35606 AC211486.1-202ENST00000416371 468 ntBASIC20.03■□□□□ 0.8
COPB2P35606 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.03■□□□□ 0.8
COPB2P35606 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.03■□□□□ 0.8
COPB2P35606 AC211476.1-201ENST00000503899 468 ntBASIC20.03■□□□□ 0.8
COPB2P35606 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.03■□□□□ 0.8
COPB2P35606 AC005829.1-201ENST00000570002 483 ntBASIC20.03■□□□□ 0.8
COPB2P35606 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 AL353135.1-201ENST00000606729 504 ntBASIC20.03■□□□□ 0.8
COPB2P35606 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 AC009949.1-201ENST00000623048 1830 ntBASIC20.03■□□□□ 0.8
COPB2P35606 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.03■□□□□ 0.8
COPB2P35606 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.03■□□□□ 0.8
COPB2P35606 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPB2P35606 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
COPB2P35606 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.02■□□□□ 0.8
COPB2P35606 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.02■□□□□ 0.8
COPB2P35606 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.02■□□□□ 0.8
COPB2P35606 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.02■□□□□ 0.8
COPB2P35606 YBX1P5-201ENST00000509441 847 ntBASIC20.02■□□□□ 0.8
COPB2P35606 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.02■□□□□ 0.8
COPB2P35606 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.02■□□□□ 0.8
COPB2P35606 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.02■□□□□ 0.8
COPB2P35606 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPB2P35606 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPB2P35606 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.02■□□□□ 0.79
COPB2P35606 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.02■□□□□ 0.79
COPB2P35606 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
COPB2P35606 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.01■□□□□ 0.79
COPB2P35606 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
COPB2P35606 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.01■□□□□ 0.79
COPB2P35606 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COPB2P35606 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 RPS8P6-201ENST00000426177 609 ntBASIC20.01■□□□□ 0.79
COPB2P35606 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.01■□□□□ 0.79
COPB2P35606 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.01■□□□□ 0.79
COPB2P35606 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COPB2P35606 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.01■□□□□ 0.79
COPB2P35606 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.01■□□□□ 0.79
COPB2P35606 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.01■□□□□ 0.79
COPB2P35606 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COPB2P35606 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.01■□□□□ 0.79
COPB2P35606 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.01■□□□□ 0.79
COPB2P35606 AC004790.2-201ENST00000623588 572 ntBASIC20.01■□□□□ 0.79
COPB2P35606 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms