Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCK1P35558 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCK1P35558 AL138688.1-201ENST00000624851 1594 ntBASIC18.54■□□□□ 0.56
PCK1P35558 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCK1P35558 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCK1P35558 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCK1P35558 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCK1P35558 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PCK1P35558 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.53■□□□□ 0.56
PCK1P35558 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.53■□□□□ 0.56
PCK1P35558 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.53■□□□□ 0.56
PCK1P35558 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCK1P35558 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.53■□□□□ 0.56
PCK1P35558 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.53■□□□□ 0.56
PCK1P35558 AC090616.6-201ENST00000582640 721 ntBASIC18.53■□□□□ 0.56
PCK1P35558 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PCK1P35558 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.53■□□□□ 0.56
PCK1P35558 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCK1P35558 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCK1P35558 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.52■□□□□ 0.56
PCK1P35558 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.52■□□□□ 0.56
PCK1P35558 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCK1P35558 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.52■□□□□ 0.56
PCK1P35558 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.52■□□□□ 0.56
PCK1P35558 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCK1P35558 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.52■□□□□ 0.56
PCK1P35558 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
PCK1P35558 AC005104.2-201ENST00000427818 678 ntBASIC18.52■□□□□ 0.56
PCK1P35558 KRT8P26-201ENST00000534154 1276 ntBASIC18.52■□□□□ 0.56
PCK1P35558 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.52■□□□□ 0.56
PCK1P35558 NTF6B-201ENST00000591913 560 ntBASIC18.52■□□□□ 0.56
PCK1P35558 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.52■□□□□ 0.56
PCK1P35558 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.52■□□□□ 0.56
PCK1P35558 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCK1P35558 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.52■□□□□ 0.55
PCK1P35558 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCK1P35558 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.52■□□□□ 0.55
PCK1P35558 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PCK1P35558 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCK1P35558 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.52■□□□□ 0.55
PCK1P35558 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCK1P35558 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.52■□□□□ 0.55
PCK1P35558 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCK1P35558 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.51■□□□□ 0.55
PCK1P35558 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCK1P35558 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.51■□□□□ 0.55
PCK1P35558 PCDHA12-202ENST00000613593 2588 ntBASIC18.51■□□□□ 0.55
PCK1P35558 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
PCK1P35558 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PCK1P35558 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.51■□□□□ 0.55
PCK1P35558 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
PCK1P35558 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.51■□□□□ 0.55
PCK1P35558 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCK1P35558 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCK1P35558 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCK1P35558 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms