Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT9P35527 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.26■□□□□ 0.67
KRT9P35527 HLA-F-220ENST00000434407 884 ntBASIC19.26■□□□□ 0.67
KRT9P35527 KRT18P65-201ENST00000439811 1286 ntBASIC19.26■□□□□ 0.67
KRT9P35527 AC092597.1-201ENST00000487352 616 ntBASIC19.26■□□□□ 0.67
KRT9P35527 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT9P35527 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT9P35527 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT9P35527 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
KRT9P35527 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT9P35527 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KRT9P35527 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
KRT9P35527 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT9P35527 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
KRT9P35527 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT9P35527 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 KRT89P-201ENST00000620027 1478 ntBASIC19.25■□□□□ 0.67
KRT9P35527 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 TMPOP1-202ENST00000424642 1267 ntBASIC19.25■□□□□ 0.67
KRT9P35527 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 KRT18P38-201ENST00000449496 1282 ntBASIC19.25■□□□□ 0.67
KRT9P35527 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT9P35527 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT9P35527 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT9P35527 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT9P35527 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KRT9P35527 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRT9P35527 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRT9P35527 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KRT9P35527 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT9P35527 KRT18P48-201ENST00000434763 852 ntBASIC19.24■□□□□ 0.67
KRT9P35527 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT9P35527 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT9P35527 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.24■□□□□ 0.67
KRT9P35527 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KRT9P35527 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KRT9P35527 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT9P35527 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT9P35527 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT9P35527 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KRT9P35527 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT9P35527 AC112907.2-201ENST00000448639 330 ntBASIC19.23■□□□□ 0.67
KRT9P35527 AC063952.2-201ENST00000498792 1227 ntBASIC19.23■□□□□ 0.67
KRT9P35527 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT9P35527 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT9P35527 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT9P35527 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT9P35527 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT9P35527 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KRT9P35527 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
KRT9P35527 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms