Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SYN1P17600 AC009336.1-201ENST00000608941 1553 ntBASIC18.99■□□□□ 0.63
SYN1P17600 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.99■□□□□ 0.63
SYN1P17600 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SYN1P17600 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SYN1P17600 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SYN1P17600 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.99■□□□□ 0.63
SYN1P17600 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.99■□□□□ 0.63
SYN1P17600 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.99■□□□□ 0.63
SYN1P17600 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 AC100803.2-201ENST00000562459 1963 ntBASIC18.99■□□□□ 0.63
SYN1P17600 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYN1P17600 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.98■□□□□ 0.63
SYN1P17600 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.98■□□□□ 0.63
SYN1P17600 SPCS2P4-201ENST00000436160 681 ntBASIC18.98■□□□□ 0.63
SYN1P17600 U91328.1-201ENST00000437528 223 ntBASIC18.98■□□□□ 0.63
SYN1P17600 AC140658.5-201ENST00000438532 169 ntBASIC18.98■□□□□ 0.63
SYN1P17600 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.98■□□□□ 0.63
SYN1P17600 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.98■□□□□ 0.63
SYN1P17600 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.98■□□□□ 0.63
SYN1P17600 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.98■□□□□ 0.63
SYN1P17600 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.98■□□□□ 0.63
SYN1P17600 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.98■□□□□ 0.63
SYN1P17600 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.98■□□□□ 0.63
SYN1P17600 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SYN1P17600 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.98■□□□□ 0.63
SYN1P17600 UXT-AS1-201ENST00000590504 1525 ntBASIC18.98■□□□□ 0.63
SYN1P17600 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.98■□□□□ 0.63
SYN1P17600 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYN1P17600 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SYN1P17600 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SYN1P17600 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SYN1P17600 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SYN1P17600 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.97■□□□□ 0.63
SYN1P17600 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
SYN1P17600 SPDYE14P-201ENST00000442619 822 ntBASIC18.97■□□□□ 0.63
SYN1P17600 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.97■□□□□ 0.63
SYN1P17600 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.97■□□□□ 0.63
SYN1P17600 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.97■□□□□ 0.63
SYN1P17600 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.97■□□□□ 0.63
SYN1P17600 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.97■□□□□ 0.63
SYN1P17600 AL590787.1-201ENST00000568856 1315 ntBASIC18.97■□□□□ 0.63
SYN1P17600 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYN1P17600 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYN1P17600 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYN1P17600 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.96■□□□□ 0.63
SYN1P17600 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.96■□□□□ 0.63
SYN1P17600 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SYN1P17600 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYN1P17600 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYN1P17600 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYN1P17600 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.96■□□□□ 0.63
SYN1P17600 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYN1P17600 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYN1P17600 AC092580.3-201ENST00000430932 139 ntBASIC18.96■□□□□ 0.63
SYN1P17600 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.96■□□□□ 0.63
SYN1P17600 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.96■□□□□ 0.63
SYN1P17600 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.96■□□□□ 0.63
SYN1P17600 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms