Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.29■■□□□ 1
COL11A2P13942 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
COL11A2P13942 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.29■■□□□ 1
COL11A2P13942 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL11A2P13942 AP000997.3-201ENST00000623333 2250 ntBASIC21.28■■□□□ 1
COL11A2P13942 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL11A2P13942 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL11A2P13942 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.28■■□□□ 1
COL11A2P13942 TUBB3P1-201ENST00000405796 1332 ntBASIC21.28■■□□□ 1
COL11A2P13942 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL11A2P13942 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL11A2P13942 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
COL11A2P13942 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.28■■□□□ 1
COL11A2P13942 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
COL11A2P13942 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.28■■□□□ 1
COL11A2P13942 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.28■■□□□ 1
COL11A2P13942 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL11A2P13942 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
COL11A2P13942 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
COL11A2P13942 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.28■■□□□ 1
COL11A2P13942 GNAS-203ENST00000306120 1878 ntBASIC21.28■■□□□ 1
COL11A2P13942 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 RNA5SP421-201ENST00000516864 134 ntBASIC21.27■■□□□ 1
COL11A2P13942 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL11A2P13942 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.27■■□□□ 1
COL11A2P13942 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
COL11A2P13942 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL11A2P13942 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
COL11A2P13942 AKAP8P1-201ENST00000434743 1349 ntBASIC21.27■□□□□ 0.99
COL11A2P13942 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
COL11A2P13942 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.26■□□□□ 0.99
COL11A2P13942 MRPS18AP1-201ENST00000414458 589 ntBASIC21.26■□□□□ 0.99
COL11A2P13942 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.26■□□□□ 0.99
COL11A2P13942 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.26■□□□□ 0.99
COL11A2P13942 TERF1P3-201ENST00000505638 1227 ntBASIC21.26■□□□□ 0.99
COL11A2P13942 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.26■□□□□ 0.99
COL11A2P13942 AL512356.2-201ENST00000546955 174 ntBASIC21.26■□□□□ 0.99
COL11A2P13942 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A2P13942 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.26■□□□□ 0.99
COL11A2P13942 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A2P13942 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.26■□□□□ 0.99
COL11A2P13942 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A2P13942 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A2P13942 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A2P13942 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.26■□□□□ 0.99
COL11A2P13942 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A2P13942 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.26■□□□□ 0.99
COL11A2P13942 MIR943-201ENST00000401286 94 ntBASIC21.26■□□□□ 0.99
COL11A2P13942 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.26■□□□□ 0.99
COL11A2P13942 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.26■□□□□ 0.99
COL11A2P13942 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.26■□□□□ 0.99
COL11A2P13942 AL158211.3-201ENST00000607385 239 ntBASIC21.26■□□□□ 0.99
COL11A2P13942 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.26■□□□□ 0.99
COL11A2P13942 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL11A2P13942 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
COL11A2P13942 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.26■□□□□ 0.99
COL11A2P13942 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL11A2P13942 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A2P13942 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.25■□□□□ 0.99
COL11A2P13942 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.25■□□□□ 0.99
COL11A2P13942 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.25■□□□□ 0.99
COL11A2P13942 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A2P13942 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.25■□□□□ 0.99
COL11A2P13942 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.25■□□□□ 0.99
COL11A2P13942 MIR6080-201ENST00000617359 66 ntBASIC21.25■□□□□ 0.99
COL11A2P13942 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A2P13942 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
COL11A2P13942 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A2P13942 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL11A2P13942 AC008677.1-201ENST00000519230 1561 ntBASIC21.25■□□□□ 0.99
COL11A2P13942 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COL11A2P13942 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.24■□□□□ 0.99
COL11A2P13942 SPCS2P4-201ENST00000436160 681 ntBASIC21.24■□□□□ 0.99
COL11A2P13942 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.24■□□□□ 0.99
COL11A2P13942 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COL11A2P13942 FAM86C2P-203ENST00000528684 1004 ntBASIC21.24■□□□□ 0.99
COL11A2P13942 AL009183.1-201ENST00000603760 355 ntBASIC21.24■□□□□ 0.99
COL11A2P13942 AL645728.2-201ENST00000641974 660 ntBASIC21.24■□□□□ 0.99
COL11A2P13942 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.24■□□□□ 0.99
COL11A2P13942 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL11A2P13942 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms