Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD8P13378 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD8P13378 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXD8P13378 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXD8P13378 AC074386.1-202ENST00000463561 864 ntBASIC19.26■□□□□ 0.67
HOXD8P13378 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD8P13378 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXD8P13378 AC027796.2-201ENST00000575326 344 ntBASIC19.26■□□□□ 0.67
HOXD8P13378 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
HOXD8P13378 ACTL9-202ENST00000612068 1252 ntBASIC19.26■□□□□ 0.67
HOXD8P13378 AC007064.4-201ENST00000637740 555 ntBASIC19.26■□□□□ 0.67
HOXD8P13378 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HOXD8P13378 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXD8P13378 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXD8P13378 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD8P13378 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD8P13378 LINC00304-203ENST00000565008 1864 ntBASIC19.26■□□□□ 0.67
HOXD8P13378 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD8P13378 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
HOXD8P13378 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
HOXD8P13378 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.25■□□□□ 0.67
HOXD8P13378 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD8P13378 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HOXD8P13378 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 ACTG1P14-201ENST00000446382 1122 ntBASIC19.25■□□□□ 0.67
HOXD8P13378 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXD8P13378 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HOXD8P13378 AL596442.2-201ENST00000610240 980 ntBASIC19.25■□□□□ 0.67
HOXD8P13378 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD8P13378 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD8P13378 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXD8P13378 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD8P13378 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD8P13378 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 AC006116.8-202ENST00000587620 1550 ntBASIC19.24■□□□□ 0.67
HOXD8P13378 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD8P13378 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD8P13378 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXD8P13378 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HOXD8P13378 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD8P13378 HMGN1P19-201ENST00000436976 333 ntBASIC19.24■□□□□ 0.67
HOXD8P13378 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXD8P13378 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD8P13378 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD8P13378 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD8P13378 AL355385.1-201ENST00000606123 409 ntBASIC19.24■□□□□ 0.67
HOXD8P13378 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXD8P13378 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD8P13378 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD8P13378 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HOXD8P13378 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD8P13378 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HOXD8P13378 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
HOXD8P13378 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 KRT18P28-201ENST00000453838 1332 ntBASIC19.24■□□□□ 0.67
HOXD8P13378 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD8P13378 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXD8P13378 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HOXD8P13378 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD8P13378 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD8P13378 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD8P13378 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms