Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPRFP10586 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPRFP10586 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.97■□□□□ 0.79
PTPRFP10586 AC067863.1-201ENST00000494933 530 ntBASIC19.97■□□□□ 0.79
PTPRFP10586 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PTPRFP10586 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.97■□□□□ 0.79
PTPRFP10586 AC051619.7-201ENST00000568314 623 ntBASIC19.97■□□□□ 0.79
PTPRFP10586 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PTPRFP10586 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPRFP10586 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPRFP10586 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PTPRFP10586 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPRFP10586 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPRFP10586 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPRFP10586 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PTPRFP10586 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.96■□□□□ 0.79
PTPRFP10586 FAM86GP-201ENST00000448322 971 ntBASIC19.96■□□□□ 0.79
PTPRFP10586 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PTPRFP10586 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPRFP10586 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPRFP10586 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.96■□□□□ 0.79
PTPRFP10586 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.96■□□□□ 0.79
PTPRFP10586 AC069335.1-201ENST00000489972 472 ntBASIC19.96■□□□□ 0.79
PTPRFP10586 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PTPRFP10586 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPRFP10586 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPRFP10586 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.95■□□□□ 0.79
PTPRFP10586 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTPRFP10586 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPRFP10586 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PTPRFP10586 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPRFP10586 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPRFP10586 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPRFP10586 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPRFP10586 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPRFP10586 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPRFP10586 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPRFP10586 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPRFP10586 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 AP000974.1-201ENST00000623909 2387 ntBASIC19.94■□□□□ 0.78
PTPRFP10586 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPRFP10586 TNXA-203ENST00000507684 2038 ntBASIC19.94■□□□□ 0.78
PTPRFP10586 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PTPRFP10586 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 TFAMP1-201ENST00000412727 736 ntBASIC19.94■□□□□ 0.78
PTPRFP10586 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPRFP10586 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.94■□□□□ 0.78
PTPRFP10586 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPRFP10586 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPRFP10586 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PTPRFP10586 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPRFP10586 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms