Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 AKR1C7P-201ENST00000305623 895 ntBASIC17.67■□□□□ 0.42
MMP2P08253 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP2P08253 UNC93B7-201ENST00000509439 705 ntBASIC17.67■□□□□ 0.42
MMP2P08253 AC106795.1-205ENST00000512851 1056 ntBASIC17.67■□□□□ 0.42
MMP2P08253 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.67■□□□□ 0.42
MMP2P08253 AC091304.2-201ENST00000564639 760 ntBASIC17.67■□□□□ 0.42
MMP2P08253 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.67■□□□□ 0.42
MMP2P08253 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 AC148477.5-201ENST00000625164 1645 ntBASIC17.67■□□□□ 0.42
MMP2P08253 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP2P08253 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP2P08253 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MMP2P08253 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP2P08253 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MMP2P08253 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MMP2P08253 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MMP2P08253 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 AC003669.1-201ENST00000334569 611 ntBASIC17.66■□□□□ 0.42
MMP2P08253 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP2P08253 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.66■□□□□ 0.42
MMP2P08253 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 SLC25A1P3-201ENST00000395415 828 ntBASIC17.66■□□□□ 0.42
MMP2P08253 KLF4P1-201ENST00000412782 1185 ntBASIC17.66■□□□□ 0.42
MMP2P08253 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP2P08253 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.66■□□□□ 0.42
MMP2P08253 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP2P08253 STK19B-204ENST00000512515 211 ntBASIC17.66■□□□□ 0.42
MMP2P08253 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.66■□□□□ 0.42
MMP2P08253 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP2P08253 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MMP2P08253 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
MMP2P08253 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MMP2P08253 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP2P08253 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 AL023806.1-201ENST00000603994 1649 ntBASIC17.65■□□□□ 0.42
MMP2P08253 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP2P08253 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP2P08253 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 SPDYE21P-201ENST00000413323 827 ntBASIC17.65■□□□□ 0.42
MMP2P08253 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
MMP2P08253 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP2P08253 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP2P08253 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP2P08253 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP2P08253 AC073592.4-201ENST00000623827 446 ntBASIC17.65■□□□□ 0.42
MMP2P08253 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MMP2P08253 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
MMP2P08253 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP2P08253 AC016396.2-201ENST00000562575 1417 ntBASIC17.64■□□□□ 0.42
MMP2P08253 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MMP2P08253 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.64■□□□□ 0.42
MMP2P08253 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms