Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND1P03886 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND1P03886 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MT-ND1P03886 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MT-ND1P03886 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.62■□□□□ 0.25
MT-ND1P03886 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MT-ND1P03886 AC005915.1-201ENST00000624912 2018 ntBASIC16.62■□□□□ 0.25
MT-ND1P03886 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.62■□□□□ 0.25
MT-ND1P03886 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 AL355075.4-201ENST00000554988 638 ntBASIC16.62■□□□□ 0.25
MT-ND1P03886 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.62■□□□□ 0.25
MT-ND1P03886 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
MT-ND1P03886 AC112497.1-201ENST00000624824 639 ntBASIC16.62■□□□□ 0.25
MT-ND1P03886 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND1P03886 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MT-ND1P03886 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND1P03886 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MT-ND1P03886 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MT-ND1P03886 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.61■□□□□ 0.25
MT-ND1P03886 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 TSPY14P-201ENST00000303979 915 ntBASIC16.61■□□□□ 0.25
MT-ND1P03886 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.61■□□□□ 0.25
MT-ND1P03886 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.61■□□□□ 0.25
MT-ND1P03886 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.61■□□□□ 0.25
MT-ND1P03886 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.61■□□□□ 0.25
MT-ND1P03886 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND1P03886 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND1P03886 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MT-ND1P03886 LINC00167-201ENST00000530583 1419 ntBASIC16.61■□□□□ 0.25
MT-ND1P03886 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MT-ND1P03886 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MT-ND1P03886 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.61■□□□□ 0.25
MT-ND1P03886 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND1P03886 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND1P03886 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND1P03886 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.6■□□□□ 0.25
MT-ND1P03886 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MT-ND1P03886 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
MT-ND1P03886 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND1P03886 MIR3180-4-201ENST00000582223 153 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms