Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.05■□□□□ 0.96
COL1A1P02452 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A1P02452 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
COL1A1P02452 C20orf181-201ENST00000623918 480 ntBASIC21.05■□□□□ 0.96
COL1A1P02452 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
COL1A1P02452 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.05■□□□□ 0.96
COL1A1P02452 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COL1A1P02452 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.04■□□□□ 0.96
COL1A1P02452 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL1A1P02452 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A1P02452 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
COL1A1P02452 AP002414.1-201ENST00000391405 1147 ntBASIC21.04■□□□□ 0.96
COL1A1P02452 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.04■□□□□ 0.96
COL1A1P02452 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.04■□□□□ 0.96
COL1A1P02452 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
COL1A1P02452 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.04■□□□□ 0.96
COL1A1P02452 MIR4469-201ENST00000583919 79 ntBASIC21.04■□□□□ 0.96
COL1A1P02452 AC010654.1-201ENST00000615722 808 ntBASIC21.04■□□□□ 0.96
COL1A1P02452 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL1A1P02452 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A1P02452 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A1P02452 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A1P02452 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A1P02452 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A1P02452 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A1P02452 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.04■□□□□ 0.96
COL1A1P02452 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
COL1A1P02452 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A1P02452 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
COL1A1P02452 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
COL1A1P02452 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
COL1A1P02452 CRYGEP-201ENST00000412192 528 ntBASIC21.03■□□□□ 0.96
COL1A1P02452 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A1P02452 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.03■□□□□ 0.96
COL1A1P02452 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A1P02452 AL596442.2-201ENST00000610240 980 ntBASIC21.03■□□□□ 0.96
COL1A1P02452 AL139327.4-201ENST00000612362 153 ntBASIC21.03■□□□□ 0.96
COL1A1P02452 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A1P02452 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A1P02452 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A1P02452 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A1P02452 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A1P02452 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL1A1P02452 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.03■□□□□ 0.96
COL1A1P02452 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.02■□□□□ 0.96
COL1A1P02452 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A1P02452 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL1A1P02452 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A1P02452 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
COL1A1P02452 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.02■□□□□ 0.96
COL1A1P02452 VN2R19P-201ENST00000442399 1052 ntBASIC21.02■□□□□ 0.96
COL1A1P02452 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.02■□□□□ 0.96
COL1A1P02452 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A1P02452 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.02■□□□□ 0.96
COL1A1P02452 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A1P02452 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL1A1P02452 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL1A1P02452 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL1A1P02452 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.02■□□□□ 0.95
COL1A1P02452 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.01■□□□□ 0.95
COL1A1P02452 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COL1A1P02452 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A1P02452 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.01■□□□□ 0.95
COL1A1P02452 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A1P02452 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.01■□□□□ 0.95
COL1A1P02452 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 LYSMD4-203ENST00000378904 2122 ntBASIC21.01■□□□□ 0.95
COL1A1P02452 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A1P02452 PRSS29P-201ENST00000440800 595 ntBASIC21.01■□□□□ 0.95
COL1A1P02452 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A1P02452 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A1P02452 SNHG9-202ENST00000564014 471 ntBASIC21.01■□□□□ 0.95
COL1A1P02452 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.01■□□□□ 0.95
COL1A1P02452 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A1P02452 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.01■□□□□ 0.95
COL1A1P02452 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.01■□□□□ 0.95
COL1A1P02452 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21■□□□□ 0.95
COL1A1P02452 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A1P02452 AL355312.1-201ENST00000407115 2176 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms