Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 YBX1P2-201ENST00000489612 999 ntBASIC15.91■□□□□ 0.14
PPP1R3DO95685 AP003733.1-201ENST00000491725 852 ntBASIC15.91■□□□□ 0.14
PPP1R3DO95685 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 ZNF444P1-201ENST00000559497 298 ntBASIC15.91■□□□□ 0.14
PPP1R3DO95685 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 AC133561.5-201ENST00000635547 218 ntBASIC15.91■□□□□ 0.14
PPP1R3DO95685 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PPP1R3DO95685 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.91■□□□□ 0.14
PPP1R3DO95685 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 IGHGP-201ENST00000390555 1178 ntBASIC15.9■□□□□ 0.14
PPP1R3DO95685 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 AL137013.1-201ENST00000432946 1228 ntBASIC15.9■□□□□ 0.14
PPP1R3DO95685 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.9■□□□□ 0.14
PPP1R3DO95685 AC073912.3-201ENST00000624414 853 ntBASIC15.9■□□□□ 0.14
PPP1R3DO95685 AC097493.4-201ENST00000641197 219 ntBASIC15.9■□□□□ 0.14
PPP1R3DO95685 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PPP1R3DO95685 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PPP1R3DO95685 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 AL353692.3-201ENST00000407031 1396 ntBASIC15.89■□□□□ 0.13
PPP1R3DO95685 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 TERF1P1-201ENST00000311003 1181 ntBASIC15.89■□□□□ 0.13
PPP1R3DO95685 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 AC113347.1-201ENST00000413321 391 ntBASIC15.89■□□□□ 0.13
PPP1R3DO95685 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.89■□□□□ 0.13
PPP1R3DO95685 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PPP1R3DO95685 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms