Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SIX6O95475 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
SIX6O95475 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX6O95475 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX6O95475 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.75□□□□□ -0.05
SIX6O95475 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.75□□□□□ -0.05
SIX6O95475 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.75□□□□□ -0.05
SIX6O95475 SOX15-203ENST00000570788 1093 ntBASIC14.75□□□□□ -0.05
SIX6O95475 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX6O95475 AC008687.6-201ENST00000596318 630 ntBASIC14.75□□□□□ -0.05
SIX6O95475 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.75□□□□□ -0.05
SIX6O95475 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SIX6O95475 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SIX6O95475 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SIX6O95475 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX6O95475 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.74□□□□□ -0.05
SIX6O95475 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SIX6O95475 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.74□□□□□ -0.05
SIX6O95475 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.74□□□□□ -0.05
SIX6O95475 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SIX6O95475 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.74□□□□□ -0.05
SIX6O95475 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SIX6O95475 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.74□□□□□ -0.05
SIX6O95475 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.74□□□□□ -0.05
SIX6O95475 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 AC091874.3-201ENST00000512672 1195 ntBASIC14.74□□□□□ -0.05
SIX6O95475 DUTP2-201ENST00000519164 463 ntBASIC14.74□□□□□ -0.05
SIX6O95475 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 AC004264.1-201ENST00000608354 794 ntBASIC14.74□□□□□ -0.05
SIX6O95475 LINC01451-201ENST00000623792 534 ntBASIC14.74□□□□□ -0.05
SIX6O95475 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.74□□□□□ -0.05
SIX6O95475 HLA-B-256ENST00000639848 1089 ntBASIC14.74□□□□□ -0.05
SIX6O95475 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.74□□□□□ -0.05
SIX6O95475 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 AC078925.2-201ENST00000624013 1973 ntBASIC14.74□□□□□ -0.05
SIX6O95475 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.74□□□□□ -0.05
SIX6O95475 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SIX6O95475 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX6O95475 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms