Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SCAF4O95104 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
SCAF4O95104 RBM17P1-201ENST00000453646 1190 ntBASIC14.46□□□□□ -0.09
SCAF4O95104 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.46□□□□□ -0.09
SCAF4O95104 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.46□□□□□ -0.09
SCAF4O95104 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.46□□□□□ -0.09
SCAF4O95104 SLC25A1P4-201ENST00000567977 778 ntBASIC14.46□□□□□ -0.09
SCAF4O95104 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.46□□□□□ -0.09
SCAF4O95104 AP000525.1-201ENST00000608286 694 ntBASIC14.46□□□□□ -0.09
SCAF4O95104 AC130371.2-201ENST00000619443 611 ntBASIC14.46□□□□□ -0.09
SCAF4O95104 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SCAF4O95104 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SCAF4O95104 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SCAF4O95104 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.46□□□□□ -0.09
SCAF4O95104 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
SCAF4O95104 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SCAF4O95104 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SCAF4O95104 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCAF4O95104 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCAF4O95104 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.46□□□□□ -0.1
SCAF4O95104 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 MESTP1-201ENST00000404287 994 ntBASIC14.45□□□□□ -0.1
SCAF4O95104 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SCAF4O95104 AC116562.2-201ENST00000507042 360 ntBASIC14.45□□□□□ -0.1
SCAF4O95104 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.45□□□□□ -0.1
SCAF4O95104 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 AC116407.2-201ENST00000613639 860 ntBASIC14.45□□□□□ -0.1
SCAF4O95104 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.45□□□□□ -0.1
SCAF4O95104 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCAF4O95104 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.45□□□□□ -0.1
SCAF4O95104 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 MST1L-201ENST00000442552 2185 ntBASIC14.44□□□□□ -0.1
SCAF4O95104 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SCAF4O95104 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 SDHAP2-201ENST00000455183 2001 ntBASIC14.44□□□□□ -0.1
SCAF4O95104 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SCAF4O95104 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAF4O95104 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.44□□□□□ -0.1
SCAF4O95104 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCAF4O95104 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms